Query= MSMg01no115_e03.b1 MSMg01no115_e03.b1 CHROMAT_FILE:
MSMg01no115_e03.b1 PHD_FILE: MSMg01no115_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:09 2005
(593 letters)
>mm_chr2_42939865_42940857
Length = 993
Score = 1125 bits (582), Expect = 0.0
Identities = 588/590 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactgtcttacctattttgttctgtatttcaatgtgatgctaccattcaacctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactgtcttacctattttgttctgtatttcaatgtgatgctaccattcaacctt 263
Query: 64 caggtccttcctatgtcaacatgctgtaacactagttcagaaacaggtataatgactgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggtccttcctatgtcaacatgctgtaacactagttcagaaacaggtataatgactgtt 323
Query: 124 attgagtcactttcccttggtttcttaatcggccactctgggatattatttgcattttat 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 324 attgagtcactttcccttggtttcttgatcggccactctgggatattatttgcattttat 383
Query: 184 gaatgaagcaatatcattgttgaccatccagttagtttattccaagaattattgtctttt 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 384 gaatgaagcaatatcattgttgaccatccagttagtttattccaagaagtattgtctttt 443
Query: 244 ataaactcatattgatgattaagtcctgtcccttgcagttatgttgacctcaaggcagat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ataaactcatattgatgattaagtcctgtcccttgcagttatgttgacctcaaggcagat 503
Query: 304 ttcagtaatttccctcatctttcatactacatttaattattgtcacctgcatcctattaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttcagtaatttccctcatctttcatactacatttaattattgtcacctgcatcctattaa 563
Query: 364 ctaggcagttcacttttttgtggaaatgagatagtgtgttctggtagcatgattcaagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctaggcagttcacttttttgtggaaatgagatagtgtgttctggtagcatgattcaagaa 623
Query: 424 tcaggctttgtctgctggggctatctctataaatatttacaaattggctatacactaatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcaggctttgtctgctggggctatctctataaatatttacaaattggctatacactaatc 683
Query: 484 acagaaataatctgtactgttttgctaaataaattgtgtttagagaatcccacaggttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acagaaataatctgtactgttttgctaaataaattgtgtttagagaatcccacaggttat 743
Query: 544 cccaaattaccagacatagccagtctaattgttcatgattgcatatttag 593
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cccaaattaccagacatagccagtctaattgttcatgattgcatatttag 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_e03.g1 MSMg01no115_e03.g1 CHROMAT_FILE:
MSMg01no115_e03.g1 PHD_FILE: MSMg01no115_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:10 2005
(584 letters)
>mm_chr2_42940596_42941579
Length = 984
Score = 1112 bits (575), Expect = 0.0
Identities = 584/591 (98%), Gaps = 7/591 (1%)
Strand = Plus / Minus
Query: 1 tttggcacaaactcatttgtaacttaagaatccttgataaaaacagaactattataaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tttggcacaaactcatttgtaacttaagaatccttgataaaaacagaactattataaaag 655
Query: 61 tcacaatgctacttttgtgatgtataaggaaatatccatcatgtaatgcttgagagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tcacaatgctacttttgtgatgtataaggaaatatccatcatgtaatgcttgagagcaga 595
Query: 121 gaaagataagaacttggagcaggatagacttagcaaggtaaagcaaggtaactaggaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaaagataagaacttggagcaggatagacttagcaaggtaaagcaaggtaactaggaagc 535
Query: 181 agttgtacttcaagggcaggaatgatgttgatttgaccaccatctttagatcactgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 agttgtacttcaagggcaggaatgatgttgatttgaccaccatctttagatcactgactt 475
Query: 241 ctgacatcatttgaactcatggggctctcagaagcagtctacagtttgcttaactcttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctgacatcatttgaactcatggggctctcagaagcagtctacagtttgcttaactcttac 415
Query: 301 cagttacccatatgatgcagaatggtttgttgagaagacaatttctagcaagctcacagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cagttacccatatgatgcagaatggtttgttgagaagacaatttctagcaagctcacagt 355
Query: 361 acaaacacagcttagggttataggtattatttagatctgagggtgctatatcaagggcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 acaaacacagcttagggttataggtattatttagatctgagggtgctatatcaagggcag 295
Query: 421 tagactatatgataacatgaagatgagtatgttgaatatttgaatatatttagaaaacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tagactatatgataacatgaagatgagtatgttgaatatttgaatatatttagaaaacca 235
Query: 481 aaccaaaccactttaccactgtaaaaaaaaaaaa-------catctagggcgatggcatt 533
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 234 aaccaaaccactttaccactgtaaaaaaaaaaaaaaaaaaccatctagggcgatggcatt 175
Query: 534 aaaactgcactataaagttagtctatgaaagtctggtaaaaattatcgctt 584
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aaaactgcactataaagttagtctatgaaagtctggtaaaaattatcgctt 124
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
