Query= MSMg01no115_i20.b1 MSMg01no115_i20.b1 CHROMAT_FILE:
MSMg01no115_i20.b1 PHD_FILE: MSMg01no115_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:31 2005
(638 letters)
>mm_chr2_107246688_107247725
Length = 1038
Score = 1180 bits (610), Expect = 0.0
Identities = 628/634 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccatacaaataaaactagcctcaaactcatagatatcctcctgcctctgcttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccatacaaataaaactagcctcaaactcatagatatcctcctgcctctgcttt 264
Query: 65 acaagtgtaagaattaagggatactccaccatacttggtactttatgccttttctattta 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 265 acaagtgtaagaattaagggatactccaccatacttggtactttctgccttttctattta 324
Query: 125 tctccatataaagactgatgactatgttttatacattacaaatattgttttatggctcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctccatataaagactgatgactatgttttatacattacaaatattgttttatggctcat 384
Query: 185 tacttattatttaactactctaaatttgtacaggaaagtttctgtaatgggaatgcctgg 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 tacttattatttaactactctaaatttgtacaggaaagtttttgtaatgggaatgcctgg 444
Query: 245 cacaactatggaacaaagatctctattattttgagtaattgacagaacaacttccatgct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cacaactatggaacaaagatctctattattttgagtaattgacagaacaacttccatgct 504
Query: 305 ttaatttgcttgtgaatgaaatgggaattgtaaaattttgtactacatatgatttttaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaatttgcttgtgaatgaaatgggaattgtaaaattttgtactacatatgatttttaag 564
Query: 365 gattaaataacatggcacctgaacttcatttaacacaacttttaaagatcatgatccaaa 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gattaaataagatggcacctgaacttcatttaacacaacttttaaagatcatgatccaaa 624
Query: 425 taatcatgagaaaagggctatgttagacatcaagattctacatggcagtggttctcaaat 484
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 625 taatcatgagaaaagggctatgttagacatcaagattatacatggcagtggttctcaaac 684
Query: 485 ttcccaatgctgtaacactttaatacaggtttccatgtggtggtaacccccaaccgtgaa 544
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 ttcccaatgctgtaacactttaatacaggtttccatgtggtggtgacccccaaccgtgaa 744
Query: 545 attattttgttggtacttcataactataatctttctactgctatgaatcttaaagtaagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 attattttgttggtacttcataactataatctttctactgctatgaatcttaaagtaagt 804
Query: 605 atctgatatctaggatatctgacatatgaccccc 638
||||||||||||||||||||||||||||||||||
Sbjct: 805 atctgatatctaggatatctgacatatgaccccc 838
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_i20.g1 MSMg01no115_i20.g1 CHROMAT_FILE:
MSMg01no115_i20.g1 PHD_FILE: MSMg01no115_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:31 2005
(545 letters)
>mm_chr2_107401048_107401993
Length = 946
Score = 1033 bits (534), Expect = 0.0
Identities = 543/546 (99%), Gaps = 1/546 (0%)
Strand = Plus / Minus
Query: 1 tttc-aaagtaccctgggataccccactcctgtattgcctggatactccacaggctcaag 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tttcaaaagtaccctgggataccccactcctgtattgcctggatactccacaggctcaag 687
Query: 60 atgttgtactcaatttccttaggttaaagagtcagcacaatgattctttccaaggtcatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 atgttgtactcaatttccttaggttaaagagtcagcacaatgattctttccaaggtcatt 627
Query: 120 gctgacaaagtatcccataattttagaggtcagaaatgcagtggctggctggctgtgact 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 626 gctgacaaagtatcccataattttagaggtcagaaatgcagtggctggcttgctgtgact 567
Query: 180 gatggaagtctataaaatgtactcactttacaggagaacactttggtatcctttggtatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatggaagtctataaaatgtactcactttacaggagaacactttggtatcctttggtatc 507
Query: 240 tcctaaagaaataaaagaaagaaagaaactacatttgcaatttgagagaaagcctgtgga 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 506 tcctaaagaaataaaagaaagaaagaaactacatttgcaatttgagaaaaagcctgtgga 447
Query: 300 ataggcacaaaaagcatcagaggagagcgatgcagccacttgacaaagaactcatcatca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ataggcacaaaaagcatcagaggagagcgatgcagccacttgacaaagaactcatcatca 387
Query: 360 tctgtaaaatgacaatgacaatcgtaatcatgttttcagaaaatcagcaaattttcaata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tctgtaaaatgacaatgacaatcgtaatcatgttttcagaaaatcagcaaattttcaata 327
Query: 420 aagagctaccatgggttaggtattctgcaaactgcttatatgattattgtgtttattcta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aagagctaccatgggttaggtattctgcaaactgcttatatgattattgtgtttattcta 267
Query: 480 gtgaaaccttttgaaaatatatctgacagaaaatatttgggataattaaataacactgaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtgaaaccttttgaaaatatatctgacagaaaatatttgggataattaaataacactgaa 207
Query: 540 ttaagg 545
||||||
Sbjct: 206 ttaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
