NCTCTATAATTTNNCNNCCNCTAATACNNACTCNNCTNNTTTCAANCAAA
ACCNGCGNNANNNCNNNCNNTTTTTTCCNACAAACANNNNNNNANTTGAA
NNGGNTTAAAGGCAAAGAGANCCTTTTTCCTGNNANNANNAAAGCCTCTT
AGAGTAGGATTGGAGGAGAGTGANNTTCCNTNNNNNNCCNTNNNCNNNNA
TTTTCNCCCATTTCATTTATTATTGAGAGTGGGCNCNNTCTTTTNNNNNN
NNNNNCNNNNNNNNNNNNNNNNACCNNNNNNCNCCNCAAATATGAAGCCG
AAAAAGGCTGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGANAAG
AAAGGGGNNNNNNNCTNNNNNNNNNNNNNNTTNNNNNNNNNTTTTTCCTT
ATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAANNNNAATTTTTTT
TATCCCAACAAGGCGGCGCTGGGNNNNNNNNNNNNNNNCNNNNNNNCNNN
NNCCNNNNNNNNNNNNNAAAAANNNCNCNNNNAANNNNNNGGNNCNNNNC
NNCNCCNNCCCCCCCCCCCCCCNCNNNNNNNCAAAANNANNNANCAAAAA
AGGAGAGAGGGGAGATCTGAGGGAAAAAAAAAAAAAGAAAAANAAAANAC
TTNNNNNNNNAAGGGNNNNNNNAAGCTTNNCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCNCCCNNNNNNNNNNNCCCCCNCCCCNCCCCCCCCNNNC
CNNNNCCCCNCCCTTGTTTNNNNTNNNNCTGTAAGAGGTCCTAGANTCCT
TTNNNNNNNNNNNNNNNNCNTTTTTNNTTTTTNTTNTCTNNNNTTTNNNT
NNNTTTNNNTNNNTNTTNNTNNTTNNTNTTTTTTTTTNNNNNNTNNNTTN
TNTTNNTTNNNNNNTNTTNNNNNNNNNNNNNTNTTTNNNNNTNNTTTTNT
NTTTTTTNTTTTTNNNNNNTNNTNNTNNNNANANNNNNNNTNNNTTTTTN
NNNNTTTTTTTTCTTTCGTGTGTTGTGTATTATTATTG

NTCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAGATAGTGGTTAGTCAACGTCCT
GCAAAGTCAACACACAGCACAACACAGAAAAACAGAGAGCTGCAGAAAGT
CATAGGATCATCAGGAAGTAAAGGGGAGAGACAGCTCAGCATATTCTAGA
AGATCAGAGGTAGACCCTGGCAGAGTTGGGATGTAGTCATCTTTGTAGAT
GACACTCATCTAACACTAGCACTGTTACCACAAGAGCGGATTCTCAGGTC
CCTGATGACTTTTGTGTCACACTTGACCCATAGCACCTAAGGAACAAAGT
GAAGTGGATTCTGGCAATATTGGTGGAAGCTGCAAACCAGATTCAACTAG
AGTCAATTGGAATTTCTAGAATGAGGTGACACTATTGGGGCAATGCAAGT
AGAGCATTAAAAACCTAAGGAGGTAATTTTCTGTGCCTCTTTTCTGTTTT
GAACTTTGGAAATTTCCATGATGATAGTGATTATGTGAAAAACCATGGTG
CAGGAGATATGCAGTTTATAATGAATGGCTCAGTTGCAGAATCTTAGTGA
ACAGTACTGCAGAGAGTTTGGAAGCCCAAACACTTTGACTTAATAAGATC
TATTGTGGGCAGAATAGCTAGTTACCAAAAGCTGGCTTGTGTTAACTAGG
AGGAGATTTGACCCCCAGGAT

Query= MSMg01no116_m05.g1 MSMg01no116_m05.g1 CHROMAT_FILE:
MSMg01no116_m05.g1 PHD_FILE: MSMg01no116_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:06 2005
         (506 letters)



>mm_chr2_115779828_115780733
          Length = 906

 Score =  971 bits (502), Expect = 0.0
 Identities = 505/506 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatagtggttagtcaacgtcctgcaaagtcaacacacagcacaacacagaaaaacaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 aagatagtggttagtcaacgtcctgcaaagtcaacacacagcacaacacagaaaaacaga 647

                                                                       
Query: 61  gagctgcagaaagtcataggatcatcaggaagtaaaggggagagacagctcagcatattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gagctgcagaaagtcataggatcatcaggaagtaaaggggagagacagctcagcatattc 587

                                                                       
Query: 121 tagaagatcagaggtagaccctggcagagttgggatgtagtcatctttgtagatgacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tagaagatcagaggtagaccctggcagagttgggatgtagtcatctttgtagatgacact 527

                                                                       
Query: 181 catctaacactagcactgttaccacaagagcggattctcaggtccctgatgacttttgtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 catctaacactagcactgttaccacaagagcggattctcaggtccctgatgacttttgtg 467

                                                                       
Query: 241 tcacacttgacccatagcacctaaggaacaaagtgaagtggattctggcaatattggtgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tcacacttgacccatagcacctaaggaacaaagtgaagtggattctggcaatattggtgg 407

                                                                       
Query: 301 aagctgcaaaccagattcaactagagtcaattggaatttctagaatgaggtgacactatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 406 aagctgcaaaccagattcaactagagtcaattggaatttctagaatgaggtgacaatatt 347

                                                                       
Query: 361 ggggcaatgcaagtagagcattaaaaacctaaggaggtaattttctgtgcctcttttctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggggcaatgcaagtagagcattaaaaacctaaggaggtaattttctgtgcctcttttctg 287

                                                                       
Query: 421 ttttgaactttggaaatttccatgatgatagtgattatgtgaaaaaccatggtgcaggag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttttgaactttggaaatttccatgatgatagtgattatgtgaaaaaccatggtgcaggag 227

                                     
Query: 481 atatgcagtttataatgaatggctca 506
           ||||||||||||||||||||||||||
Sbjct: 226 atatgcagtttataatgaatggctca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space:   444416
Effective search space used:   444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)