Query= MSMg01no117_f12.b1 MSMg01no117_f12.b1 CHROMAT_FILE:
MSMg01no117_f12.b1 PHD_FILE: MSMg01no117_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:52 2005
(657 letters)
>mm_chr2_71343036_71344093
Length = 1058
Score = 1199 bits (620), Expect = 0.0
Identities = 644/654 (98%), Gaps = 5/654 (0%)
Strand = Plus / Minus
Query: 4 ggaattcataaagaat-cattaaaacatcatgttcaaagagaaaagccattagtgtaaaa 62
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ggaattcataaagaataaattaaaacatcatgttcaaagagaaaagccattagtgtaaaa 683
Query: 63 gaagctgacacagttatttatataagcgtgtagatgtccatacacttccaaagttaatat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaagctgacacagttatttatataagcgtgtagatgtccatacacttccaaagttaatat 623
Query: 123 tcatcggtagtgtgtgatagggcaagaggtaagaagactttttgattcattttattttct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 622 tcatcggtagtgtgtgatagggcaagaggtaagaagactttttgattcattttgttttct 563
Query: 183 tccctatggtgagcttttaaaagctatctacttctccataaatgcataaatgaaaaaata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tccctatggtgagcttttaaaagctatctacttctccataaatgcataaatgaaaaaata 503
Query: 243 cccactttcactgctattacagtaaaagtaatagttgagacaaatccctcactggccaca 302
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 502 tccactttcactgctattacagtaaaagtaatagctgagacaaatccctcactggccaca 443
Query: 303 gcttacacttgtgaggagagccggcaaactgcacgcctctgtttttatacagcttaatat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gcttacacttgtgaggagagccggcaaactgcacgcctctgtttttatacagcttaatat 383
Query: 363 ctaaaaataacgttttatatttataagtggttgggaaaaaagtcagaagaaatagaatct 422
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctaaaaatagcgttttatatttataagtggttgggaaaaaagtcagaagaaatagaatct 323
Query: 423 tacaagataaaattgtgtggaattcaagttccacacctcccctcagtcatttgcaagtgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tacaagataaaattgtgtggaattcaagttccacacctcccctcagtcatttgcaagtgg 263
Query: 483 tcatggccgtttctaagctaaggcagacctggctagccatgacaaagacttattgacaaa 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcatggccgtttctaagctaaggcagacctggctagccatgacaaagacttattgacaa- 204
Query: 543 aacaaacaaacaaacaaacaaatgatcaaatgattgtcatctggtgtctggagggtggag 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ---aaacaaacaaacaaacaaatgatcaaatgattgtcatctggtgtctggagggtggag 147
Query: 603 tgtcctccagaaagcagaagctgcgacttctgggtggctatctcaatccctgta 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tgtcctccagaaagcagaagctgcgacttctgggtggctatctcaatccctgta 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_f12.g1 MSMg01no117_f12.g1 CHROMAT_FILE:
MSMg01no117_f12.g1 PHD_FILE: MSMg01no117_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:52 2005
(467 letters)
>mm_chr2_71226857_71227723
Length = 867
Score = 888 bits (459), Expect = 0.0
Identities = 465/467 (99%)
Strand = Plus / Plus
Query: 1 cattaatttctaagcaagtctctaggggccagcaagccgcacaggctgggacgccgaaga 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 cattaatttctaagcaagtctctagtggccagcaagccgcacaggctgggacgccgaaga 260
Query: 61 catggggtgagggcatcctcacgtgcggtggctaggcaaccgcgggcgccttctcacggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catggggtgagggcatcctcacgtgcggtggctaggcaaccgcgggcgccttctcacggt 320
Query: 121 gctagccccgcctcctgaggcacttccgccgccgcgcgcctggaccttctccctctcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagccccgcctcctgaggcacttccgccgccgcgcgcctggaccttctccctctcatt 380
Query: 181 ggttcgtggctcgccgaggatgggcgggggaaacgcgtaagtccttgcggtcacttccgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttcgtggctcgccgaggatgggcgggggaaacgcgtaagtccttgcggtcacttccgg 440
Query: 241 cccgggagcgcgcgggttgatttgtccttcctcagctgcgggcgctcggagctcggaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cccgggagcgcgcgggttgatttgtccttcctcagctgcgggcgctcggagctcggaaat 500
Query: 301 ggcgggtaagttcccgggaaaagtttagcaaggggaggaggcgggtgcttctggggaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcgggtaagttcccgggaaaagtttagcaaggggaggaggcgggtgcttctggggaaga 560
Query: 361 acgttgaggcggccgtgacagtggccgcctggaactttcgggctctagccgaggttccag 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 acgttgaggcggccgtgacagtggccgcctggaactttcgggctctagcagaggttccag 620
Query: 421 aaggcctctcccttccgcgaggcactgagggtcggggactggctccc 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggcctctcccttccgcgaggcactgagggtcggggactggctccc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
