ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAATT
CTCATGCAATTTCGAAACTCATAATGCAAGCATTACACCGAATCCACAAC
AATGAACTTTTCTCTTAGCACTGATTTCATTGTGCTTCATAAATTTGGGT
GTGCTGTGCCTTCATTTTCATTGATTTCTCGAAAGTCTTTAATTTCTCTC
TTTATTTGTTTCCTGACAATATTTGTTGATCATTGAGTAGAGAGTTGCCC
ATGAATGTAAAGGCTTTCTGATGTTTCTGTTGTTGAATTTTTTATCCATG
CTTGTTTGATAAGGTGCAAGGTATTATTTTAATTTTCTTGTATGTCTTGA
GGCTTGCTTTGTGACTGTGCTAAGTTTTGGAAAAGAATCCATGAGGTACT
AAGAATGTATATTCTTTTGTGTTTGGGTGAAATATTCTATAAATGTCTGT
TAGGTCTATTTGTTCATAATGTCTGTTAGGTTCATTATTTCTCTTTTTAG
TTTTTGTCTGGATGACCTGTCAATTGGTGAGAGTGGGATATTGAAGTCTT
CCACTATTAATGTGTGGGGTTCTATGTACAATATAATCTTTAGAAATATT
TCTTTTACAAATGTGGGTGGCCTTGTATTTTGTGCATAGATGTTCAGAGT
TAAAATATCATTCTGATAGACTTTTCCTTTGATGACTATCAAGTGTCCTT
CCCTGTCTCTTTTGATGAATTTTGGTTGGAAATCTAC

ATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTAGAAAGCTTCTGGTCTTCTGCGTGTGTT
AGAATCCAGGAGTAGGTTCTAGCACTTGTGAAGAAACGCCTGAGCAGCAG
GGTAGATGAACTTGCTGGTGAGAATGAGCGAAAGCAGGCCAACGGCAAGA
GTTTCCTTCTTGCTTGTCCTTTGCTGTGGGCTGCTGTGGGCTGCTACCAG
AAGGCGTGGCCCAGATTTAGGCTTCATCTTCTCACCTCAAATGATCCAAT
CAAGAAAATACCACAAAGGTCTTCCCTGAGGCTTGAGTTGATTGCAAATA
TGGTCAAGTCAATAACCAAGATTAGCCATCGCAATAGATTATGACATTTT
TAAAAAGATTTGATAGAAATAAATTAGTGTCCTCTCACTATTTTGATAGG
AAATGTGAGTCACAGTGCTTACAGTATTTATTTGTAAATAACTATCATCA
ATATTTATTTATTATTTCTGTTTCCTTGTTAAAACTGCTTCAGGGAATTC
AGAAGCTTTTTACCACATGTCATTTCACTTTTCTTAAAGTTAGATGTCAA
ACATCTGTAACACTAAATTAAAAGAAGACATATCCAGATGCTGATCATAA
ATGGATGCTATTAATCTGGGTAATTAACTGTTACAACAATTGGATCTCAG
GAGTTAAATACAGCAAATTTATTTCTCAAACCCA

Query= MSMg01no117_k18.g1 MSMg01no117_k18.g1 CHROMAT_FILE:
MSMg01no117_k18.g1 PHD_FILE: MSMg01no117_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:18 2005
         (613 letters)



>mm_chr2_106422186_106423198
          Length = 1013

 Score =  936 bits (484), Expect = 0.0
 Identities = 496/500 (99%)
 Strand = Plus / Minus

                                                                        
Query: 114  gcaggccaacggcaagagtttccttcttgcttgtcctttgctgtgggctgctgtgggctg 173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 gcaggccaacggcaagagtttccttcttgcttgtcctttgctgtgggctgctgtgggctg 954

                                                                        
Query: 174  ctaccagaaggcgtggcccagatttaggcttcatcttctcacctcaaatgatccaatcaa 233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  ctaccagaaggcgtggcccagatttaggcttcatcttctcacctcaaatgatccaatcaa 894

                                                                        
Query: 234  gaaaataccacaaaggtcttccctgaggcttgagttgattgcaaatatggtcaagtcaat 293
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  gaaaataccacaaaggtctaccctgaggcttgagttgattgcaaatatggtcaagtcaat 834

                                                                        
Query: 294  aaccaagattagccatcgcaatagattatgacatttttaaaaagatttgatagaaataaa 353
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 833  aaccaagattagccatcgcaatagattatgacattttaaaaaagatttgatagaaataaa 774

                                                                        
Query: 354  ttagtgtcctctcactattttgataggaaatgtgagtcacagtgcttacagtatttattt 413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  ttagtgtcctctcactattttgataggaaatgtgagtcacagtgcttacagtatttattt 714

                                                                        
Query: 414  gtaaataactatcatcaatatttatttattatttctgtttccttgttaaaactgcttcag 473
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 713  gtaaataactatcatgaatatttatttattatttctgtttccttgttaaaactgcctcag 654

                                                                        
Query: 474  ggaattcagaagctttttaccacatgtcatttcacttttcttaaagttagatgtcaaaca 533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  ggaattcagaagctttttaccacatgtcatttcacttttcttaaagttagatgtcaaaca 594

                                                                        
Query: 534  tctgtaacactaaattaaaagaagacatatccagatgctgatcataaatggatgctatta 593
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  tctgtaacactaaattaaaagaagacatatccagatgctgatcataaatggatgctatta 534

                                
Query: 594  atctgggtaattaactgtta 613
            ||||||||||||||||||||
Sbjct: 533  atctgggtaattaactgtta 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)