CTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCATTGGCACCATACTCAGTAACATCCAAAAAATGTCTGGCATG
CCTCATTAGAAGTCAACCTTTGCTGTTCTATATCAATCACAATATGAAAG
AACATCAGAAACAGTTAGGCCAAAGGTCTAAAGCCACTGAGATGAGAGAT
AAAAGATGGAACTAATCAGATGCTTGGATCGTCCAGAAAGCAAAGCATGG
ATTTAGGATGAAAAGCACTCAGCTATTTCTGACACAGCAAACAGAAAAGA
GCATGACCTTCAGCTTGGGAAAGGATGTATCAAGTCCAAAACTTCTGAAA
GGTCAGGGATTATATACGAAGGAATCCTGATAAAAATACGGACAGGAGTA
AATTGCCTTAAAACCTGGTGACCTGAGAGACATATTCGGCCCACTATTCT
TTTCTATATAAGAGAGAACATCCTTTATCCCAGCTAGCAGAAGCTTTGAT
ACCTTTTTTCCCATGTTCCTATTCACCTTTTCTAATTTTAATATACTTAA
AATTTATTCTTCAATTTATATGCAGAATTCTTAATATATCAGGAACAATT
GTTCAGCTTTTTAAAATTTTTCAGGAATTGTAAAGGAGTTTGGAAACTAC
ACAATGGAACAAAACTACAGCTGTGGGTTACAGGAGAATTATAATGCATA
TAACATCCCA

CATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAATAAAAAATCCTGACAACATTCTTT
ACAGAAGAATAAATTGTCAAATTCATAAAATAAAAGGAAATAGACAGAGA
AAGTTATACTTAACAAACAGACCAATGCTTGAAAAATTACCATTTTAGAT
TTCAGGATATACTACAGAAATGGAGTAATTAAAACAGCATGGTACTTTCT
TAAAAAGAGACATATTGATGAATGGTAAAAAGAGGGATACCCAAAGATAA
TTACACATGATTATAGCTATCCAATACTCAACATAGTTAAGAAGACTATG
TGTTGGGGAAAAATAGCATTTTCAAGAAATAGTGCTAGGCAAACTATGTA
TTCATGTGGAAAAGAATGAAATTAGACCCACACTTATCAAAACACACAAC
AATAAGCCCCAAGTGGGTCAAAGACCTCAATATGAAAGGCAAAATCCTGA
AATGACTAGAATATTCAGTCAGTACCATAACATGATACTATAAGAAAGGA
CTTTCTAAATAAGACTCCATTTTCTCAGGAATAGGTCAATATTAACAAAT
AAAGCATCATAAAACTGAAAATCCTCTGTATAGCAAGAAACTAAATTAAG
TAAAAGGTATGGCCACATATGGGAAGGAAATCATTGTCAACTATATGTCT
AATAGGGAACTAAC

Query= MSMg01no120_p08.b1 MSMg01no120_p08.b1 CHROMAT_FILE:
MSMg01no120_p08.b1 PHD_FILE: MSMg01no120_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:34 2005
         (656 letters)



>mm_chr2_39867275_39868330
          Length = 1056

 Score = 1237 bits (640), Expect = 0.0
 Identities = 649/652 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccattggcaccatactcagtaacatccaaaaaatgtctggcatgcctcattagaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattccattggcaccatactcagtaacatccaaaaaatgtctggcatgcctcattagaa 797

                                                                       
Query: 65  gtcaacctttgctgttctatatcaatcacaatatgaaagaacatcagaaacagttaggcc 124
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 796 gtcaacctttgctgttctatatcaatcacaatatggaagaacatcagaaacagttaggcc 737

                                                                       
Query: 125 aaaggtctaaagccactgagatgagagataaaagatggaactaatcagatgcttggatcg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aaaggtctaaagccactgagatgagagataaaagatggaactaatcagatgcttggatcg 677

                                                                       
Query: 185 tccagaaagcaaagcatggatttaggatgaaaagcactcagctatttctgacacagcaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tccagaaagcaaagcatggatttaggatgaaaagcactcagctatttctgacacagcaaa 617

                                                                       
Query: 245 cagaaaagagcatgaccttcagcttgggaaaggatgtatcaagtccaaaacttctgaaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cagaaaagagcatgaccttcagcttgggaaaggatgtatcaagtccaaaacttctgaaag 557

                                                                       
Query: 305 gtcagggattatatacgaaggaatcctgataaaaatacggacaggagtaaattgccttaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gtcagggattatatacgaaggaatcctgataaaaatacggacaggagtaaattgccttaa 497

                                                                       
Query: 365 aacctggtgacctgagagacatattcggcccactattcttttctatataagagagaacat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aacctggtgacctgagagacatattcggcccactattcttttctatataagagagaacat 437

                                                                       
Query: 425 cctttatcccagctagcagaagctttgataccttttttcccatgttcctattcacctttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cctttatcccagctagcagaagctttgataccttttttcccatgttcctattcacctttt 377

                                                                       
Query: 485 ctaattttaatatacttaaaatttattcttcaatttatatgcagaattcttaatatatca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctaattttaatatacttaaaatttattcttcaatttatatgcagaattcttaatatatca 317

                                                                       
Query: 545 ggaacaattgttcagctttttaaaatttttcaggaattgtaaaggagtttggaaactaca 604
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcaacaattgttcagctttttaaaatttttcaggaattgtaaaggagtttggaaactaca 257

                                                               
Query: 605 caatggaacaaaactacagctgtgggttacaggagaattataatgcatataa 656
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 caatgaaacaaaactacagctgtgggttacaggagaattataatgcatataa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)