Query= MSMg01no122_m18.b1 MSMg01no122_m18.b1 CHROMAT_FILE:
MSMg01no122_m18.b1 PHD_FILE: MSMg01no122_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:40 2005
(744 letters)
>mm_chr2_138140787_138141932
Length = 1146
Score = 1108 bits (573), Expect = 0.0
Identities = 589/595 (98%), Gaps = 2/595 (0%)
Strand = Plus / Minus
Query: 152 tccactccctcctgttctcttctcccctcctctaccccacaaggtcttcctcctctctct 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 tccactccctcctgttctcttctcccctcctctaccccacaaggtcttcctcctctctct 1087
Query: 212 gtccccctccctctctcaccccctactctcttgtctgtagccttttctccttccctcccc 271
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 1086 gtccccctccctctctcacccactactctcttatctgtagccttttctccttccctcccc 1027
Query: 272 atgctatttgcttttgctctcctgaccttccactatctcctgccctgctccttccttccc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 atgctatttgcttttgctctcctgaccttccactatctcctgccctgctccttccttccc 967
Query: 332 ttccaatccttccttctctcatctttatcacccttccatgagtatcgcccacagcctctt 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 ttccaatccttccttctctcatctttatcacccttccatgagtatcgcccacagcctctt 907
Query: 392 tcccctgaatcttttccctcatactcatttctgtttatttcacaagtgaagacttgtgag 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tcccctgaatcttttccctcatactcatttctgtttatttcacaagtgaagacttgtgag 847
Query: 452 ccagcaatttggcaaaatatgcaagtttgaactgacagtcgtgagttggctgctc--agg 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 846 ccagcaatttggcaaaatatgcaagtttgaactgacagtcgtgagttggctgctcagagg 787
Query: 510 cgtttccgtcagccggaatgccatcctggagattcatggtctgtgaaacagggaaacagc 569
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 786 cgtttccgtcagccggaatgccatcctggagattcatggcctgtgaaacagggaaacagc 727
Query: 570 aacagaggcccctttctagcagaggaattttactggcagtgctgctcacagatctgcaag 629
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aacagaagcccctttctagcagaggaattttactggcagtgctgctcacagatctgcaag 667
Query: 630 gcctgatttagcggatgggagatcaatgtgaaaatattgtcaagcttctgaaaccgggaa 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gcctgatttagcggatgggagatcaatgtgaaaatattgtcaagcttctgaaaccgggaa 607
Query: 690 gatatttacattacttgactcatgggcatcatagttttatagttgtgaaaggaaa 744
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gatatttacattacttgactcatgggcatcatagttttatagttgtgaaaggaaa 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 744
Length of database: 1146
Length adjustment: 10
Effective length of query: 734
Effective length of database: 1136
Effective search space: 833824
Effective search space used: 833824
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no122_m18.g1 MSMg01no122_m18.g1 CHROMAT_FILE:
MSMg01no122_m18.g1 PHD_FILE: MSMg01no122_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:31:40 2005
(678 letters)
>mm_chr2_137988203_137989279
Length = 1077
Score = 1265 bits (654), Expect = 0.0
Identities = 672/678 (99%), Gaps = 1/678 (0%)
Strand = Plus / Plus
Query: 1 tggaatcccatgttatatccactgactttcctgaaattgcccacttgctctttagcagta 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tggaatcccatgttatatccactgactttcatgaaattgcccacttgctctttagcagta 260
Query: 61 ctatagctaccccatataaatatttgagtaattgtcacagattttttggatgttatatat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatagctacaccatataaatatttgagtaattgtcacagattttttggatgttatatat 320
Query: 121 accttgtaatctcagcacccaggaactgagacaggggcatcacaaacttgagaataaccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 accttgtaatctcagcacccaggaactgagacaggggcatcacaaacttgaaaataaccg 380
Query: 181 tgggtactttaagagtcattgactccaaaacagatcaatcaagcaaaatcagactatgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggtactttaagagtcattgactccaaaacagatcaatcaagcaaaatcagactatgag 440
Query: 241 aatacaggcaaaatgatccatcttcccaggttttaaaatccagcacgtctgtgtcatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatacaggcaaaatgatccatcttcccaggttttaaaatccagcacgtctgtgtcatttt 500
Query: 301 catttgggacacttccagtctaactttctttctgcttcactggccaggtgtccaggacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttgggacacttccagtctaactttctttctgcttcactggccaggtgtccaggacat 560
Query: 361 ggcctgcagcttagcaggcaacacagaaaactgacttctttgggttccactaaaaactac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcctgcagcttagcaggcaacacagaaaactgacttctttgggttccactaaaaactac 620
Query: 421 atgtccaggaggtactcaatcccttgatcaaattagcagctcctggagagttcctgggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtccaggaggtactcaatcccttgatcaaattagcagctcctggagagttcctgggca 680
Query: 481 gcctggtttttctatttgatatcacttggagctcagatcacatctggaaaaataaagtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcctggtttttctatttgatatcacttggagctcagatcacatctggaaaaataaagtac 740
Query: 541 tgtccccaggatatacatgcaagcagtgacaatctactggtggtgacagacactgtcact 600
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 tgtccccaggatataaatgcaagcagtgacaatctactggtggtgagagacactgtcact 800
Query: 601 tcaaaatatctttctgaaatttcatttgggaaaaaacaggaaccttgacaaaaattttaa 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 tcaaaatatctttctgaaatttcatttgggaaaaa-caggaaccttgacaaaaattttaa 859
Query: 661 aaggaagaccttgagacc 678
||||||||||||||||||
Sbjct: 860 aaggaagaccttgagacc 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1077
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1067
Effective search space: 712756
Effective search space used: 712756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
