Query= MSMg01no124_l15.b1 MSMg01no124_l15.b1 CHROMAT_FILE:
MSMg01no124_l15.b1 PHD_FILE: MSMg01no124_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:12 2005
(270 letters)
>mm_chr2_93067621_93068289
Length = 669
Score = 427 bits (221), Expect = e-124
Identities = 242/249 (97%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 gccatgggcagactctccaggatttcaagccaattgcttgtttacgagcccagcccgtct 60
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 448 gccatgggcagactccccaggatttcaagccaattgcttgtttatgagcccagcccgtct 389
Query: 61 gtcttgggaagaggcccagaggcacagccagtgagccaaagagccccccccctcccagcc 120
||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 388 gtcttgggacgaggcccagaggcacagccagtgagccaaagag-cccccctctcccagcc 330
Query: 121 agaactggatggccccaaccggttgctgtgctcacaagtgccttccatgttagtgctgtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 329 agaactggatggccccaaccggttgctgtgctcacaagtgccttccatgttagtgctggt 270
Query: 181 ttaagtgcccaccttggctgggtatcgttttatccatttctgggactttctaaccacttc 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttaagtgcccatcttggctgggtatcgttttatccatttctgggactttctaaccacttc 210
Query: 241 cagcctttg 249
|||||||||
Sbjct: 209 cagcctttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 669
Length adjustment: 9
Effective length of query: 261
Effective length of database: 660
Effective search space: 172260
Effective search space used: 172260
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_l15.g1 MSMg01no124_l15.g1 CHROMAT_FILE:
MSMg01no124_l15.g1 PHD_FILE: MSMg01no124_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:36:12 2005
(305 letters)
>mm_chr2_92971040_92971744
Length = 705
Score = 520 bits (269), Expect = e-152
Identities = 296/305 (97%)
Strand = Plus / Plus
Query: 1 tgcctctcaagtgttggaattaaaggtttgcaccagtttatgctatgctggggatgccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctctcaagtgttggaattaaaggtttgcaccagtttatgctatgctggggatgccac 260
Query: 61 cccgggctccccacattaggtaagtgctctatgggttgcattgtctccctagcctgctgg 120
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagggctccccacattaggcaagtgctctatgggttgcattgtctccctagcctgctgg 320
Query: 121 tcaagcttcagtgtgtcaggaagctaggcctgggatccccagctaggaggctctgttctc 180
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaccttcagtgtgtcaggaagctagacctgggatccccagctaggaggctctgttctc 380
Query: 181 tcctattccactcactgctgggacttacataattcagaatgtttttcacagacatccaag 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctattccactcaatgctgggacttacataattcagaatgtttttcacagacatccaag 440
Query: 241 ctcaaccatcccttctaaagcccttcctggaagttttatttatgagagaagttcggtgtc 300
||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 441 ctcaaccgtcccttctaaagcccttcctggaagttttagctatgagagaagttcggcgtc 500
Query: 301 acaca 305
|||||
Sbjct: 501 acaca 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
