Query= MSMg01no125_f14.b1 MSMg01no125_f14.b1 CHROMAT_FILE:
MSMg01no125_f14.b1 PHD_FILE: MSMg01no125_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:22 2005
(530 letters)
>mm_chr2_146552415_146553344
Length = 930
Score = 978 bits (506), Expect = 0.0
Identities = 521/526 (99%)
Strand = Plus / Plus
Query: 5 gaattctgtattactcccctatcgattttctagtaattctgctgggctcattcctccaat 64
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtattactcacgtatcgattttctagtaattctgctgggctcattcctccaat 264
Query: 65 aataatgtaatatcatgatgccaaacatatttttgaattatgataatagcttcttagagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aataatgtaatatcatgatgccaaacatatttttgaattatgataatagcttcttagagg 324
Query: 125 gtcattaacctcggcattgatcacaggtctagttgtatgccaacaggatactcagtgatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcattaacctcggcattgatcacaggtctagttgtatgccaacaggatactcagtgatg 384
Query: 185 tttgacagtgtaaatgtcacattgctgctgtaacaggctaccccaaacacagtaacttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgacagtgtaaatgtcacattgctgctgtaacaggctaccccaaacacagtaacttaa 444
Query: 245 taatagtgaagatctgtttcctgccagttctgcttgtcatgcgttttaagtgggtcctaa 304
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 445 taatagtgaagatctgtttcctgccagttctgcaggtcaggcgttttaagtgggtcctaa 504
Query: 305 aggactgaacaccaagggagctaggctgattctcctagaagcttcagaaggaatttgtcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aggactgaacaccaagggagctaggctgattctcctagaagcttcagaaggaatttgtcc 564
Query: 365 cttgtctcttctggatgttgggttctatggttgcccttccttcagccttggccctgatac 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cttgtctcttctggatgttgggttctatggttgcccttccttcagccttggccctgatac 624
Query: 425 tctcattattccactctggtatctccttcaggcccatccagacactgcattatattctct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctcattattccactctggtatctccttcaggcccatccagacactgcattatattctct 684
Query: 485 gcattttaagacactgagcttaatcacatctaaatggcctttccaa 530
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcattttaagacactgagcttaatcacatctaaatggcctttccaa 730
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 930
Length adjustment: 10
Effective length of query: 520
Effective length of database: 920
Effective search space: 478400
Effective search space used: 478400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_f14.g1 MSMg01no125_f14.g1 CHROMAT_FILE:
MSMg01no125_f14.g1 PHD_FILE: MSMg01no125_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:22 2005
(241 letters)
>mm_chr2_146715112_146715753
Length = 642
Score = 460 bits (238), Expect = e-134
Identities = 241/242 (99%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 catcttttgaaa-atttctataaacacatataagaagtcattaggatgaaactcattaag 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 catcttttgaaacatttctataaacacatataagaagtcattaggatgaaactcattaag 383
Query: 60 tcacttctttgttcaatgagaaatttatagatcacagtgagaaaaggaggcactatgaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcacttctttgttcaatgagaaatttatagatcacagtgagaaaaggaggcactatgaaa 323
Query: 120 atcaataaacaaactcggtctgtcatctcacctgaggaagcttcccaagcagaatgcttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcaataaacaaactcggtctgtcatctcacctgaggaagcttcccaagcagaatgcttc 263
Query: 180 tctccagcccacttctttgcagatgtacagtgttctgaagctgccatcatggggaccagc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tctccagcccacttctttgcagatgtacagtgttctgaagctgccatcatggggaccagc 203
Query: 240 gg 241
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
