This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-130A03
Chromosome
2 (Build37)
Map Location
141,781,299 - 141,913,589
singlet/doublet
doublet
Overlap gene
none
Upstream gene
none
Downstream gene
LOC668913
,
LOC668914
,
Kif16b
,
Snrpb2
,
Otor
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC668913
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668913
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins
pseudo
: _no_value
name
LOC668914
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668914
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins
pseudo
: _no_value
name
Kif16b
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:16558
MGI:1098240
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Snrpb2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:20639
MGI:104805
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Otor
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:57329
MGI:1888678
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Kif16b
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124487286
GeneID:16558
MGI:1098240
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: kinesin family member 16B
transcript_id
: NM_001081133.1
name
Snrpb2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142353628
GeneID:20639
MGI:104805
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: U2 small nuclear ribonucleoprotein B
transcript_id
: NM_021335.3
name
Otor
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:50400075
GeneID:57329
MGI:1888678
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: otoraplin
transcript_id
: NM_020595.2
name
Kif16b
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124487287
GeneID:16558
MGI:1098240
definition
GO_component
: GO:0005871 - kinesin complex [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]
GO_function
: GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO_process
: GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA]
codon_start
: 1
note
: kinesin 16B; N-3 kinesin
product
: kinesin family member 16B
protein_id
: NP_001074602.1
name
Snrpb2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:23956110
CCDS:CCDS16808.1
GeneID:20639
MGI:104805
definition
GO_component
: GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA]
GO_function
: GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO_process
: GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]
codon_start
: 1
product
: U2 small nuclear ribonucleoprotein B
protein_id
: NP_067310.1
name
Otor
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:10181138
CCDS:CCDS16809.1
GeneID:57329
MGI:1888678
definition
GO_component
: GO:0005576 - extracellular region [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]
GO_process
: GO:0001502 - cartilage condensation [Evidence IMP]
codon_start
: 1
product
: otoraplin
protein_id
: NP_065620.1
name
LOC668913
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668913
definition
number
: 1
pseudo
: _no_value
name
LOC668914
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149250178
GeneID:668914
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins
product
: similar to RNA binding motif protein, X-linked 2
pseudo
: _no_value
transcript_id
: XR_034955.1
clone name
MSMg01-299J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085F06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545G06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365C19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-146G21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-535J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-469B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-529M21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-355M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-517D18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-232D04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477I22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-355P18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-471B22
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-491D15
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-468B17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327D07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-277G21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-277F21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-468B10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-373E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-393F23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336P16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277H22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-161N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-311G20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-527K02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507N10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-154G03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486C05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-169O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300I08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-503P14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-486N17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-516I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-306D16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-206I24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393F05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-048D23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-107E14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337G22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471B24
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-426B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-191D20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085N16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-466B02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-464H17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-175G08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-135G21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-189I05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327G04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-218L14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-484F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-120D10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-420G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-272C10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495G19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-453I20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-211I07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446I20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-305P17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-440L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312L17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-055H23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-425I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-347I01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-353F08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-135I18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-322A02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-188K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-522M05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-433G18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-426F19
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-162G05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-049A19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-474E18
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-318I21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-105J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-175K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-531K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-442F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277M10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-417E11
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-122M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-182C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-480K18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-460G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-367K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519P01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-411K01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331M15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-453E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488H11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-152H12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-424M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-322K02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-303C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-183B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-312F16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-478A02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389J16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-420E03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-160D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-009C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268K20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-337F02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142G05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-205N01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224F01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146H05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-042E23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-208M09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262I13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-213J14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181M08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-265A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-316P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141F11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-059P02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-070K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-184E22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-220G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-250N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247I19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-304C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129O15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-343D24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170B23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-310B23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-073H02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-099A10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-223P08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-112K05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-284N15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321F11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-014K24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098J24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-305M20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-155J02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343L16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-230F07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-079E14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-079E16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-312A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-339M17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-140J14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-051A08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106F06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-344K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-172D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186J19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-173J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-008C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212O02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075L03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-330B16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275P20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-255H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-193A06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012J01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-159N04
singlet/doublet
doublet
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singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-131N16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-143E20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-146K13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-159F04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105P20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-129G11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-046B17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-005K21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163N06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-079P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-015L23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-058D23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-167J07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-081L02
singlet/doublet
singlet
plural/unique
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clone name
B6Ng01-170N08
singlet/doublet
singlet
plural/unique
unique
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B6Ng01-106B11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-054H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-012M08
singlet/doublet
singlet
plural/unique
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B6Ng01-031J02
singlet/doublet
singlet
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B6Ng01-170I05
singlet/doublet
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plural/unique
unique
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B6Ng01-170I11
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clone name
B6Ng01-022M18
singlet/doublet
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plural/unique
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B6Ng01-082N03
singlet/doublet
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B6Ng01-117C05
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unique
clone name
B6Ng01-121C24
singlet/doublet
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plural/unique
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B6Ng01-133O02
singlet/doublet
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plural/unique
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B6Ng01-087F07
singlet/doublet
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plural/unique
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clone name
B6Ng01-040J14
singlet/doublet
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plural/unique
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B6Ng01-156D24
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B6Ng01-111D03
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B6Ng01-151E10
singlet/doublet
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clone name
B6Ng01-258A13
singlet/doublet
singlet
plural/unique
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clone name
B6Ng01-026O15
singlet/doublet
singlet
plural/unique
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