Query= MSMg01no130_o12.b1 MSMg01no130_o12.b1 CHROMAT_FILE:
MSMg01no130_o12.b1 PHD_FILE: MSMg01no130_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:56 2005
(158 letters)
>mm_chr2_37476374_37476936
Length = 563
Score = 284 bits (147), Expect = 1e-81
Identities = 157/163 (96%), Gaps = 5/163 (3%)
Strand = Plus / Plus
Query: 1 gattagagccaaagatagtggattgcaaaacattgttccaactataataaggcaaatgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gattagagccaaagatagtggattgcaaaacattgttccaactataataaggcaaatgca 260
Query: 61 gatctgaaatcacaggcattgtggcaaatgtaaataacaaaacaaaaacaaacaaaaaac 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatctgaaatcacagggattgtggcaaatgtaaataacaaaacaaaaacaaacaaaaaac 320
Query: 121 -----taaacaaaaaaacaggatcaagccacaaaaatctcagc 158
||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaactaaacaaaaaaacaggatcaagccacaaaaatctcagc 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 563
Length adjustment: 8
Effective length of query: 150
Effective length of database: 555
Effective search space: 83250
Effective search space used: 83250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_o12.g1 MSMg01no130_o12.g1 CHROMAT_FILE:
MSMg01no130_o12.g1 PHD_FILE: MSMg01no130_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:56 2005
(119 letters)
>mm_chr2_37651411_37651929
Length = 519
Score = 224 bits (116), Expect = 1e-63
Identities = 116/116 (100%)
Strand = Plus / Minus
Query: 1 cagccctgaagaagggggccccaaagctataaagttcacaccttccctctctccagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cagccctgaagaagggggccccaaagctataaagttcacaccttccctctctccagcact 257
Query: 61 tcagcaggagctgtaaagccatttcctccccctggtgtgtgtgtgggggggggggg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tcagcaggagctgtaaagccatttcctccccctggtgtgtgtgtgggggggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
