Query= MSMg01no131_a14.b1 MSMg01no131_a14.b1 CHROMAT_FILE:
MSMg01no131_a14.b1 PHD_FILE: MSMg01no131_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:07 2005
(637 letters)
>mm_chr2_32888200_32889236
Length = 1037
Score = 1185 bits (613), Expect = 0.0
Identities = 631/637 (99%)
Strand = Plus / Plus
Query: 1 agccagctgttccctggccacaacagctgtccccttacccccttttacactgtgggatct 60
||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct: 201 agccagctgttccctggccacgacagctgtccccttacccccatttagactgtgggatct 260
Query: 61 ggttctctaggggctcctctggcctgttccctctagattatcttccctgcagatctgccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttctctaggggctcctctggcctgttccctctagattatcttccctgcagatctgccc 320
Query: 121 taaggggacctcagtgacatgcaaggggacttcaaactccctgcagggccacctcttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaggggacctcagtgacatgcaaggggacttcaaactccctgcagggccacctcttctc 380
Query: 181 ttctctaagtcttcaaaaagtagcagtttgaggccctacttcctgctctctgactccatc 240
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ttctctaagtcttcaaaaagtaacagtttgaggccctacttcctgttctctgactccatc 440
Query: 241 cccctgtctacctctcttctctaaagcagctaacatctcacattggtacttgtcatttcc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 cccctgtctacctctcttctctaaagcagctaacatctcacattggcacttgtcatttcc 500
Query: 301 acagggtcagattgtatcagtcgtccgcatagttgagaactataaactcagactgggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acagggtcagattgtatcagtcgtccgcatagttgagaactataaactcagactgggaat 560
Query: 361 agccactgcttgcttggcttgctttgtctctcattcgaattgcaactttcttggtccctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agccactgcttgcttggcttgctttgtctctcattcgaattgcaactttcttggtccctt 620
Query: 421 tgctccttccagccagaaagccattctcttagtttctagcacgccatgttctttcagcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctccttccagccagaaagccattctcttagtttctagcacgccatgttctttcagcct 680
Query: 481 cagggactccacagatgctccctgtttgaaattcttttctccagactctccaactgttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagggactccacagatgctccctgtttgaaattcttttctccagactctccaactgttcc 740
Query: 541 cactcatcactcccaagttcccccagagaagtcttctgtaatccccagagtcggcaaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cactcatcactcccaagttcccccagagaagtcttctgtaatccccagagtcggcaaagt 800
Query: 601 gcccgtggcactctctgcgccaactcaatcctgtaag 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcccgtggcactctctgcgccaactcaatcctgtaag 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_a14.g1 MSMg01no131_a14.g1 CHROMAT_FILE:
MSMg01no131_a14.g1 PHD_FILE: MSMg01no131_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:07 2005
(252 letters)
>mm_chr2_33055981_33056631
Length = 651
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 1 caggacagaagctgtttttttcctcaggtcctcctgaatctccgcccccctggttcctag 60
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 451 caggacagaagctg-ttttttcctcaggtcctcctgaatccccgcccccctggttcctag 393
Query: 61 gctataaatagatggcaggtggggggaggggacagaaggcgaaggtcgatgaactttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctataaatagatggcaggtggggggaggggacagaaggcgaaggtcgatgaactttggg 333
Query: 121 ttgaatttgggtcaagttttcaaataaacagggtcaagacttacgttttgaagttttgcc 180
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 332 ttgaatttgggtcaagttttcaaataaacagggtcaagccttacattttgaagttttgcc 273
Query: 181 atgaaactcttaacagtaccagaaagtgactgcaaagttacagaatgcagcctacatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgaaactcttaacagtaccagaaagtgactgcaaagttacagaatgcagcctacatttc 213
Query: 241 atttagggacct 252
||||||||||||
Sbjct: 212 atttagggacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 651
Length adjustment: 9
Effective length of query: 243
Effective length of database: 642
Effective search space: 156006
Effective search space used: 156006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
