TTATCATAATTTGCGGCCGCTAAACGATCACATCCAAAGAGGATCCGCGG
AATTCACTATTCCTGTGACTTATTTTGTTGACCCCAAGAAGCTGAACCTG
AAGAAAAAATGATTAACAATAGTGTGAATAATGCTATAGACTTCTGACAG
CTATACAAATTTATTTCACATACAATCCAGTGAAATAATTTTACTTTACT
GTTTTCCCGCAAAAAAAAAAAATTGGCATAAATTCAAGGAACAAAAGGAG
ACACATAAATCATGAACCACTTCACAGGATGAAGCTATCAAAATATGTCT
ACTGTCAAAAAATATATATATAAAAATTCACAATTCTAGTATGAACATGC
CTTGTTTGGTTAAAGGATATAATGGGAGCTATGTAAATTTAAACTGAACA
GCATAAGAACTGAATAAGAATGGCTCCCACGGGCTCATATAATTGAATGC
TTAGTCACCAAGGAGTGGTCCTATTTTAGAGGGATTGGAAGGCATGGCCT
TGCTGGAGTAGATGTGACCTAGTTGATGGGACTGTGTCACTCACTGGGTG
TGTTCTTTTGAGGTTCAGAAGCCCACACCAGGCCCGATGTCTCTTTGCTT
TCACATCAGGATATAGGTCTCTGTTACTTCTTTAGCACCACAGTTGCCAA
TCATCATGCTTCCCACCATGATAAAAATGGACTAAACTAAACCTCTGAAA
CT

CACCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTGCCCCACAGAATTCCTAAACCTTCCCCTGCTACCCCAG
GCCCAATTGGGGAAGTTTACCCTGGCCACCCACCCAAAATTCTCACATGG
TTCATTGGCTTGCTCTCCTGCCCTTGCGTGCTTGCTCGCTCCCTCCCTCC
GTCCCTGGCTCTCCTCTTCCCTCCTTCCCCTTCTCTTTTACTCCCTCACT
CCTTCCCTCCCCCTATCCCCACCCCACACACAACTCTTAAGTGCCCAGCC
ATTGGTTTGGCTGTTGTCTTCTTTACTGATCAGTTAAACACCAATGGGGA
CAAGGATTTTTATCGCCCGCCCACCCACATTCCGGATTAAATCAAAGCAT
TAGAACCAATCTCCAGAATTCAACAATCAATAGTTAAGCCATTTGGTCTT
GTATAATTTTTAACACAGGTTCAGATTTTCATTTTTTTCTTTGGGTTTTG
CTTAGGACTCTGGACGTTTGGGTTAAGTCTTTTTTTGTCTTAACATGTGC
TTTGAGTAAGTGCTTGCCTACTTACTAAAGGTGGATCTAGGGAACTGGGG
CTGATCTGGAAATGCACTGGCTCCTTTAAGAGAGCCTGCTTCTTGCTCCT
GGGATTTCCATCTTCCCCCAGCTCAGTGCCCTCTGGGAAGAAGAGGGTGN

Query= MSMg01no131_a19.b1 MSMg01no131_a19.b1 CHROMAT_FILE:
MSMg01no131_a19.b1 PHD_FILE: MSMg01no131_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:08 2005
         (634 letters)



>mm_chr2_38909895_38910928
          Length = 1034

 Score = 1210 bits (626), Expect = 0.0
 Identities = 632/634 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttattttgttgaccccaagaagctgaacctgaagaaaaaatgattaacaatagtgtgaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cttattttgttgaccccaagaagctgaacctgaagaaaaaatgattaacaatcgtgtgaa 260

                                                                       
Query: 61  taatgctatagacttctgacagctatacaaatttatttcacatacaatccagtgaaataa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgctatagacttctgacagctatacaaatttatttcacatacaatccagtgaaataa 320

                                                                       
Query: 121 ttttactttactgttttcccgcaaaaaaaaaaaattggcataaattcaaggaacaaaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttactttactgttttcccgcaaaaaaaaaaaattggcataaattcaaggaacaaaagg 380

                                                                       
Query: 181 agacacataaatcatgaaccacttcacaggatgaagctatcaaaatatgtctactgtcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacacataaatcatgaaccacttcacaggatgaagctatcaaaatatgtctactgtcaa 440

                                                                       
Query: 241 aaaatatatatataaaaattcacaattctagtatgaacatgccttgtttggttaaaggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatatatatataaaaattcacaattctagtatgaacatgccttgtttggttaaaggat 500

                                                                       
Query: 301 ataatgggagctatgtaaatttaaactgaacagcataagaactgaataagaatggctccc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatgggagctatgtaaatttaaactgaacagcataagaactgaataagaatggctccc 560

                                                                       
Query: 361 acgggctcatataattgaatgcttagtcaccaaggagtggtcctattttagagggattgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgggctcatataattgaatgcttagtcaccaaggagtggtcctattttagagggattgg 620

                                                                       
Query: 421 aaggcatggccttgctggagtagatgtgacctagttgatgggactgtgtcactcactggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggcatggccttgctggagtagatgtgacctagttgatgggactgtgtcactcactggg 680

                                                                       
Query: 481 tgtgttcttttgaggttcagaagcccacaccaggcccgatgtctctttgctttcacatca 540
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtgttcttttgaggttcagaagcctacaccaggcccgatgtctctttgctttcacatca 740

                                                                       
Query: 541 ggatataggtctctgttacttctttagcaccacagttgccaatcatcatgcttcccacca 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggatataggtctctgttacttctttagcaccacagttgccaatcatcatgcttcccacca 800

                                             
Query: 601 tgataaaaatggactaaactaaacctctgaaact 634
           ||||||||||||||||||||||||||||||||||
Sbjct: 801 tgataaaaatggactaaactaaacctctgaaact 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no131_a19.g1 MSMg01no131_a19.g1 CHROMAT_FILE:
MSMg01no131_a19.g1 PHD_FILE: MSMg01no131_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:08 2005
         (246 letters)



>mm_chr2_39037275_39037920
          Length = 646

 Score =  460 bits (238), Expect = e-134
 Identities = 244/246 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagttaagccatttggtcttgtataatttttaacacaggttcagattttcatttttttct 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tagttaagtcatttggtcttgtataatttttaacacaggttcagattttcatttttttct 387

                                                                       
Query: 61  ttgggttttgcttaggactctggacgtttgggttaagtctttttttgtcttaacatgtgc 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 386 ttgggttttgcttaggactctggacgtttgggttaagtctttttttgttttaacatgtgc 327

                                                                       
Query: 121 tttgagtaagtgcttgcctacttactaaaggtggatctagggaactggggctgatctgga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttgagtaagtgcttgcctacttactaaaggtggatctagggaactggggctgatctgga 267

                                                                       
Query: 181 aatgcactggctcctttaagagagcctgcttcttgctcctgggatttccatcttccccca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatgcactggctcctttaagagagcctgcttcttgctcctgggatttccatcttccccca 207

                 
Query: 241 gctcag 246
           ||||||
Sbjct: 206 gctcag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space:   150969
Effective search space used:   150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)