Query= MSMg01no131_d15.b1 MSMg01no131_d15.b1 CHROMAT_FILE:
MSMg01no131_d15.b1 PHD_FILE: MSMg01no131_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:22 2005
(242 letters)
>mm_chr2_75253725_75254372
Length = 648
Score = 429 bits (222), Expect = e-125
Identities = 239/248 (96%), Gaps = 6/248 (2%)
Strand = Plus / Plus
Query: 1 atataggaatagtttcacttcttgcatgctctagcttacttattgccacaaaatgtgcaa 60
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 201 atataggaatagtttcacttcttgcatgctctagcttacttaatgagacaaaatgtgcaa 260
Query: 61 aaacaaccaatatccatagcagataagtcagatattggttccctgtg------ttttttt 114
||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 aaacaaccaatatccatagcagataagtcagatattggttccctgtggtttttttttttt 320
Query: 115 ttttgaggcttcagaataacatttttttgctggatctcagagcacacagcaatgctcatg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgaggcttcagaataacatttttttgctggatctcagagcacacagcaatgctcatg 380
Query: 175 tctaagtgttctgagcgtatccctatgatagcctgccttgcctgcttcatggatgtactc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaagtgttctgagcgtatccctatgatagcctgccttgcctgcttcatggatgtactc 440
Query: 235 agacatgg 242
||||||||
Sbjct: 441 agacatgg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 648
Length adjustment: 9
Effective length of query: 233
Effective length of database: 639
Effective search space: 148887
Effective search space used: 148887
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_d15.g1 MSMg01no131_d15.g1 CHROMAT_FILE:
MSMg01no131_d15.g1 PHD_FILE: MSMg01no131_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:22 2005
(190 letters)
>mm_chr2_75377760_75378349
Length = 590
Score = 352 bits (182), Expect = e-102
Identities = 188/190 (98%)
Strand = Plus / Minus
Query: 1 tcaaaacgtggggtgctttgtagattttagttgtcactcatagcttgccctgcttctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcaaaacgtggggtgctttgtagattttagttgtcactcatagcttgccctgcttctctt 331
Query: 61 ctaggttcttcaagtgtgtttcatttgggggtgaactttaaacaacacatggtatactgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttaggttcttcaagtgtgtttcatttgggggtgaactttaaacaacacatggtatactgg 271
Query: 121 gaactatggattccctcagatactatggctggcgaatccgggcagccgagcagccttggg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 270 gaactatggattccctcagatactatggctggcgaatccgggcagccgagcatccttggg 211
Query: 181 agagctggca 190
||||||||||
Sbjct: 210 agagctggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
