Query= MSMg01no131_e17.b1 MSMg01no131_e17.b1 CHROMAT_FILE:
MSMg01no131_e17.b1 PHD_FILE: MSMg01no131_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:28 2005
(669 letters)
>mm_chr2_82954034_82955108
Length = 1075
Score = 1197 bits (619), Expect = 0.0
Identities = 657/673 (97%), Gaps = 10/673 (1%)
Strand = Plus / Minus
Query: 5 gaattctgcttt---atcactacctcttactgtataattgtattgtgataattattgttt 61
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaattctgctttaaaa--actacctcttactgtataattgtattgtgataattattgttt 818
Query: 62 ttattttgctgcaaagagcatcattatcaataataacaacagaaaacaaagtgaggataa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttattttgctgcaaagagcatcattatcaataataacaacagaaaacaaagtgaggataa 758
Query: 122 tgaatattttcatctcagaataagtaactatatattgttattcaaagatgatctttttag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tgaatattttcatctcagaataagtaactatatattgttattcaaagatgatctttttag 698
Query: 182 ctacacattttttttaatgctcatttgctgggatcactattgttataatatgcacatggc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ctacacattttttttaatgctcatttgctgggatcactattgttataatatgcacatggc 638
Query: 242 ctctagcctgggatcttacagattacacaacatagctatcttcccagtactcctgtgtcc 301
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 637 ctctagcctgggatcttacagactacacaacatagctatcttcccagtactcctgtgtcc 578
Query: 302 agtcctttgcatttgcagagattctcccctcaagtctacagtagacaagcttttcattcc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 agtcctttgcatttgcagagattctcccctcaagtctacagtagacaagcttttcattcc 518
Query: 362 tcaagttctgcctcacaggtgtccttccttatctaggttactgatggtagtaaccaagtt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tcaagttctgcctcacaggtgtccttccttatctaggttactgatggtagtaaccaagtt 458
Query: 422 acccgaccaagctgttcttcatgaacttcctttggcaattaatccacttgattaattttg 481
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 457 acccgaccaagctgttcttcatgaacttcatttggcaattaatccacttgattaattttg 398
Query: 482 atgtcaagcaaatgctttat-tttcacatacttgaggactgtcttactttgcatatgttc 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgtcaagcaaatgctttatgtttcacatacttgaggactgtcttactttgcatatgttc 338
Query: 541 tcatcttggactgaggctatatagcaagggttaactgaaaaataaatttgcatctttggt 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 337 tcatcttggactgaggctatatagcaagggttaactgaaaaataaatttgcaactttggt 278
Query: 601 cctgtcctttttcctttattac---ggttgtttctttctcatgttcatca-ttcctgcct 656
||||||| |||||||||||||| ||||||||||| ||||||||||||| | |||||||
Sbjct: 277 cctgtccattttcctttattacggtggttgtttcttcctcatgttcatcactgcctgcct 218
Query: 657 gtgcttatggaat 669
|||||||||||||
Sbjct: 217 gtgcttatggaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1075
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1065
Effective search space: 701835
Effective search space used: 701835
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_e17.g1 MSMg01no131_e17.g1 CHROMAT_FILE:
MSMg01no131_e17.g1 PHD_FILE: MSMg01no131_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:28 2005
(338 letters)
>mm_chr2_82841308_82842043
Length = 736
Score = 642 bits (332), Expect = 0.0
Identities = 336/338 (99%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 1 aacagtacattgcaactttctaagatgtccagttttatgtatacttaatcacatatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagtacattgcaactttctaagatgtccagttttatgtatacttaatcacatatttaa 260
Query: 61 aattgggaaaatcaatttataaattattctccttccattttgaattttagcaacatacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgggaaaatcaatttataaattattctccttccattttgaattttagcaacatacta 320
Query: 121 tctgtggtttgcttccatatgaagaatggcagattgttgttaaccagtagcttcttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtggtttgcttccatatgaagaatggcagattgttgttaaccagtagcttcttcatt 380
Query: 181 tgttaaatatacacattaaaaatggttctttttattttattttagcgaagcagaagaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttaaatatacacattaaaaatggttctttttattttattttagcgaagcagaagaatt 440
Query: 241 tctaccagatgcaaaggctaatgcattagaaggttggattttttttttaacttttaagaa 300
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 tctaccagatgcaaaggctaatgcattagaaggttggatttttttt--aacttttaagaa 498
Query: 301 ctgatgaacaaaaaacattgttgattattttgataact 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgatgaacaaaaaacattgttgattattttgataact 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 736
Length adjustment: 9
Effective length of query: 329
Effective length of database: 727
Effective search space: 239183
Effective search space used: 239183
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
