Query= MSMg01no132_d06.b1 MSMg01no132_d06.b1 CHROMAT_FILE:
MSMg01no132_d06.b1 PHD_FILE: MSMg01no132_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:39 2005
(631 letters)
>mm_chr2_134746186_134747212
Length = 1027
Score = 1193 bits (617), Expect = 0.0
Identities = 626/631 (99%), Gaps = 4/631 (0%)
Strand = Plus / Plus
Query: 1 tatgaggtaaatggagcatcagggatcagagacgtctctctcatgcaccattctgtttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatgaggtaaatggagcatcagggatcagagacgtctctctcatgcaccattctgtttcc 260
Query: 61 cactcagtagacaaatgaaactccggctgccactgctgaagcactgcccccagcgtcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 cactcagtagacaaatgaaactccggctgccactgctgaagcactgcccccagcgccctt 320
Query: 121 ctgctcatgctgagtccaccatctgtaatcctctcacctgcccttcctgattgatagacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ctgctcatgctgagtccaccatctgtaatcctctcacctgcccttcctgat----agacc 376
Query: 181 aggtctgcttcccatctagtcacggggtataaatttaaaatgttcattcgcttggcctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aggtctgcttcccatctagtcacggggtataaatttaaaatgttcattcgcttggcctca 436
Query: 241 gtaaatccttgctgaaggatttgtcctaaggaaataaatggaattggtgcttgaggtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gtaaatccttgctgaaggatttgtcctaaggaaataaatggaattggtgcttgaggtggc 496
Query: 301 gcagcctggaggttggcagaacttacatcaggagttgggatttggtatgaatgtggcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gcagcctggaggttggcagaacttacatcaggagttgggatttggtatgaatgtggcttt 556
Query: 361 ggtgcaagactacctagattccaataatggctctatcatttcctgacggcttgagcttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtgcaagactacctagattccaataatggctctatcatttcctgacggcttgagcttgg 616
Query: 421 cacatcacttttccttttgccttgatggcttcataccaaaatagagataataatagcaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cacatcacttttccttttgccttgatggcttcataccaaaatagagataataatagcaac 676
Query: 481 tgcctcctacagttatcagcaagattaaaaatgtcaggaaaggtgatgcactttgcacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgcctcctacagttatcagcaagattaaaaatgtcaggaaaggtgatgcactttgcacag 736
Query: 541 tgcctgatgcctgagaggaactcagtgttcatgtaagcacttgctcagccttcacatgtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgcctgatgcctgagaggaactcagtgttcatgtaagcacttgctcagccttcacatgtg 796
Query: 601 attgcattatttaaaacgtctcattttcttt 631
|||||||||||||||||||||||||||||||
Sbjct: 797 attgcattatttaaaacgtctcattttcttt 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1027
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1017
Effective search space: 631557
Effective search space used: 631557
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_d06.g1 MSMg01no132_d06.g1 CHROMAT_FILE:
MSMg01no132_d06.g1 PHD_FILE: MSMg01no132_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:39 2005
(551 letters)
>mm_chr2_134905294_134906245
Length = 952
Score = 1044 bits (540), Expect = 0.0
Identities = 549/552 (99%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 1 tccctataactggtctggaaatctttctctagcctaggctaggcctggtacttggtatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tccctataactggtctggaaatctttctctagcctaggctaggcctggtacttggtatca 543
Query: 61 ttctgccttccagagactatactgcagctttgtacatccataactggttgggaaagaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttctgccttccagagactatactgcagctttgtacatccataactggttgggaaagaagt 483
Query: 121 atgtggttaccaggcaaaaatgaaatgcagctgaga-ttttttttactctgatgacaggc 179
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 482 atgtggctaccaggcaaaaatgaaatgcagctgagatttttttttactctgatgacaggc 423
Query: 180 actgttctagaagaaaactcaagtcaattgctcctgttgtttgtaagcttaaaggattag 239
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 actgttctagaagaaaattcaagtcaattgctcctgttgtttgtaagcttaaaggattag 363
Query: 240 ctccatatttttaataaagactcaacagaacaactctgttcaaattcgtaagatttccaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctccatatttttaataaagactcaacagaacaactctgttcaaattcgtaagatttccaa 303
Query: 300 ccaagaggaactcatcaggtgagtgactagggcacagactattaatatagccttaacttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ccaagaggaactcatcaggtgagtgactagggcacagactattaatatagccttaacttc 243
Query: 360 tgagggtcaacttctctttagtaatgctaactgtattaattttgtgtgtgtatgtgtatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgagggtcaacttctctttagtaatgctaactgtattaattttgtgtgtgtatgtgtatt 183
Query: 420 tgtatgtgtgtatgcaggtgcacatggggtggtatgtgtagacatattagcacatgttta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgtatgtgtgtatgcaggtgcacatggggtggtatgtgtagacatattagcacatgttta 123
Query: 480 agagtaccttagatactttctaacttttattctactatttttagaataagacagggtttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agagtaccttagatactttctaacttttattctactatttttagaataagacagggtttc 63
Query: 540 tcactgaatcct 551
||||||||||||
Sbjct: 62 tcactgaatcct 51
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 952
Length adjustment: 10
Effective length of query: 541
Effective length of database: 942
Effective search space: 509622
Effective search space used: 509622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
