Query= MSMg01no132_g04.b1 MSMg01no132_g04.b1 CHROMAT_FILE:
MSMg01no132_g04.b1 PHD_FILE: MSMg01no132_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:53 2005
(662 letters)
>mm_chr2_173065975_173067037
Length = 1063
Score = 1261 bits (652), Expect = 0.0
Identities = 658/660 (99%), Gaps = 1/660 (0%)
Strand = Plus / Minus
Query: 4 gaattctctctgccct-ccaataactcacgaacaggattgacactgtgctgacagcgggt 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gaattctctctgccctgccaataactcacgaacaggattgacactgtgctgacagcgggt 804
Query: 63 gtttaaagatgttcgatgccggtgacaatagaaaaaaaaaagcccattagttctttccat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtttaaagatgttcgatgccggtgacaatagaaaaaaaaaagcccattagttctttccat 744
Query: 123 ttgggtaatagcgagaaagataaaaggtgcgtctttgccctccctcactgaagcagcatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ttgggtaatagcgagaaagataaaaggtgcgtctttgccctccctcactgaagcagcatt 684
Query: 183 taatcacgaagctctcaagtgattagacaggcctgcctgccaccttccttcccgggaccg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taatcacgaagctctcaagtgattagacaggcctgcctgccaccttccttcccgggaccg 624
Query: 243 ctcgttacccgggcctgctcagcatgcacacgaggtctcactcggtgctagatgctcggt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctcgttacccgggcctgctcagcatgcacacgaggtctcactcggtgctagatgctcggt 564
Query: 303 gctggcctcctgtgtggtcacctcctgcagcaaagcatctgcagctaagcacggaggtgg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gctggcctcctgtgtggtcacctcctgcagcaaagcatctgcagctaagcacggaggtgg 504
Query: 363 aggtctgtggtcctctgccactgagggagaagctggcccatctctacctcacagtccttt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aggtctgtggtcctctgccactgagggagaagctggcccatctctacctcacagtccttt 444
Query: 423 gcatgccagctcaaggtctcaaaccaggagaagcatggaaaactgggcctctgttctgtg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcatgccagctcaaggtctcaaaccaggagaagcatggaaaactgggcctctgttctgtg 384
Query: 483 gctcctacgtgcttgtccctccttcagtggccagatccccagggagcctttgctgtccac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctcctacgtgcttgtccctccttcagtggccagatccccagggagcctttgctgtccac 324
Query: 543 tccctgctggacctgctggacaggccctggctgaagagactgcagagctgatctgtgccc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tccctgctggacctgctggacaggccctggctgaagagactgcagagctgatctgtgccc 264
Query: 603 gaccccgtgttataaggttcctgcccagggaagggttagtccagggcttccaggtcgctc 662
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaccccgtgttataagattcctgcccagggaagggttagtccagggcttccaggtcgctc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1063
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1053
Effective search space: 686556
Effective search space used: 686556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_g04.g1 MSMg01no132_g04.g1 CHROMAT_FILE:
MSMg01no132_g04.g1 PHD_FILE: MSMg01no132_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:53 2005
(608 letters)
>mm_chr2_172947302_172948309
Length = 1008
Score = 1083 bits (560), Expect = 0.0
Identities = 599/614 (97%), Gaps = 8/614 (1%)
Strand = Plus / Plus
Query: 1 tctttcttccagtgtcagttccctggtgctaggattgcaggcattttccacctggcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tctttcttccagtgtcagttccctggtgctaggattgcaggcattttccacctggcttag 256
Query: 61 cttgccttccattttttctaaatgtctggggggtgggggtggggg---caaaatggccca 117
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 257 cttgccttccattttttctaaatgtctggggagtgggggtggggggggcaaaatggcgca 316
Query: 118 gcaggaaaaggtgcttgctgccaagcctgcctgtggaaatttgatccctggaacctacat 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gcaggaaaaggtgcttgctgccaagcctgcctgtggaaatttgatccctggaacctacat 376
Query: 178 agtgaaaacagaaaaagttctttttttggttcttgcttttttcttccttaaaaaaaaaa- 236
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 377 agtgaaaacagaaaaagttctttttt-ggttcttgcttttttcttccttaaaaaaaaaaa 435
Query: 237 -gaaaggttgtattcattttattttgtgtgtgcgcgtgtctgcttgtacgcatgtgcacc 295
||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 436 agaaaggttgtattcattttgttttgtgtgtgcgcgtgtctgcttgcacgcatgtgcacc 495
Query: 296 tgcgtgtgtgtggtccctgaggaggtcgcaggaggaggtccctgcgtgtgtgtggtccct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgcgtgtgtgtggtccctgaggaggtcgcaggaggaggtccctgcgtgtgtgtggtccct 555
Query: 356 gaggaggtcgcaggaggg-ttcctgaatttctgacctgggcttagggatgcttgcaagct 414
|||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 556 gaggaggtcgcaggagagcttc-tgaatttctgacctgggcttagggatgcttgcaagct 614
Query: 415 gccgcgtgggtgctgaagacggaacccggatcctccgcaacagcagcacgtgttcctagc 474
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 615 gccgcatgggtgctgaagacggaacctggatcctccgcaacagcagcacgtgttcctagc 674
Query: 475 tgaaggcctctttccacagcccttcctcttcttgtagataaattttcatgtagcccagga 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgaaggcctctttccacagcccttcctcttcttgtagataaattttcatgtagcccagga 734
Query: 535 tggcccatgtacctggggatgactttgaactgctgatcctgtccccacttcttgagtgct 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tggcccatgtacctggggatgactttgaactgctgatcctgtccccacttcttgagtgct 794
Query: 595 aacattaccagctt 608
||||||||||||||
Sbjct: 795 aacattaccagctt 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
