Query= MSMg01no132_g10.b1 MSMg01no132_g10.b1 CHROMAT_FILE:
MSMg01no132_g10.b1 PHD_FILE: MSMg01no132_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:54 2005
(619 letters)
>mm_chr2_172171442_172172460
Length = 1019
Score = 1123 bits (581), Expect = 0.0
Identities = 610/629 (96%), Gaps = 17/629 (2%)
Strand = Plus / Plus
Query: 4 gaattctatatgaatttctagtccggcccctggacttgttccttttgaagttcagttgag 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gaattctatatgaacttccagtccggcccctggacttgttccttttgaagttcagttgag 255
Query: 64 gcctgggcactgggcccaggaggcggcatcgccggtgccgccggtacatctaccgcttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcctgggcactgggcccaggaggcggcatcgccggtgccgccggtacatctaccgcttcc 315
Query: 124 ctgtgctccttgcgccacccttttatctagctggaagagcaggctcagagcaggcagtcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctgtgctccttgcgccacccttttatctagctggaagagcaggctcagagcaggcagtcc 375
Query: 184 atcccgttttgttgtggttacttgccctgagtgctcagagtgaaaaccagcttccattca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atcccgttttgttgtggttacttgccctgagtgctcagagtgaaaaccagcttccattca 435
Query: 244 gacagcagcatatctcaagtaggtctcaaaaaaattttaaaaaaa------------gca 291
|||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct: 436 gacagcagcatatctcaagtaggtctcaaaaaaa----aaaaaaaaaaaaaaaaaaagca 491
Query: 292 ggagttcagaagtagtagatcggaagcgtcgaggtctgggggagtctgaaagaaagatca 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggagttcagaagtagtagatcggaagcgtcgaggtctgggggagtctgaaagaaagatca 551
Query: 352 ctgccatgaatcgggcagttctgagtactgtctgctcccgtggcttttcagttagggatt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctgccatgaatcgggcagttctgagtactgtctgctcccgtggcttttcagttagggatt 611
Query: 412 ggtcgctttccttgagtgccgagcacaatgatggaaggacttccttcccctctctcctgc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ggtcgctttccttgagtgccgagcacaatgatggaaggacttccttcccctctctcctgc 671
Query: 472 ctgacagacaggacactggcctcagctctgctcctgagcacaagtcaggatactcacagc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ctgacagacaggacactggcctcagctctgctcctgagcacaagtcaggatactcacagc 731
Query: 532 gtaccgtgcttcagggcaccgcatagcttccctctcctccagaaagtcttccctgactac 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtaccgtgcttcagggcaccgcatagcttccctctcctccagaaagtcttccctgactac 791
Query: 592 cagtagtgtgcccccc-gccctatactgt 619
|||||||||||||||| ||||||||||||
Sbjct: 792 cagtagtgtgcccccccgccctatactgt 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_g10.g1 MSMg01no132_g10.g1 CHROMAT_FILE:
MSMg01no132_g10.g1 PHD_FILE: MSMg01no132_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:54 2005
(451 letters)
>mm_chr2_172330553_172331403
Length = 851
Score = 806 bits (417), Expect = 0.0
Identities = 445/457 (97%), Gaps = 6/457 (1%)
Strand = Plus / Minus
Query: 1 agggccagcatctcccctgggagacacctgcctctccatctcaccctctgctctcagcag 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 497 agggccagcatctcccctgggagacacctgcatctccatctcaccctctgctctcagcag 438
Query: 61 gctgttccaagtctcctggggcagcaggggttggcaggggagaagctggggtatttccag 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 437 gctgttccaagtctcctggggcagcaggggttggctggggagaagctggggtatttccag 378
Query: 121 tgagaggcgtctcagctcctctctgcagagtgcactgtcaagcaagaaggaaggagctgt 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 377 tgagaggcgtctcagctcctctctgcagagtgcactgtcaagcaggaaggaaggagctgt 318
Query: 181 ccttcccagccctgagtattgcccaaagcatgcaggttctctggtcctctggttcccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccttcccagccctgagtattgcccaaagcatgcaggttctctggtcctctggttcccaca 258
Query: 241 gcagggtgtggcacaaagctgttgaggtgcctccaggagcagaaaaggagactgtgt--- 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gcagggtgtggcacaaagctgttgaggtgcctccaggagcagaaaaggagactgtgtaag 198
Query: 298 -gagtacaagtgtttgtacatgtgtgcctgtgtacgtgtgtatgtgtgtgtgtaagggtg 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgagtacaagtgtttgtacatgtgtgcctgtgtacgtgtgtatgtgtgtgtgtaagggtg 138
Query: 357 agcgcaaccttacatgtatatgtgtgtgagtgcatgtgtgtgagtgtgtatgtgtgtgag 416
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agcgtaaccatacatgtatatgtgtgtgagtgcatgtgtgtgagtgtgtatgtgtgtgag 78
Query: 417 cttgtatgtatgtgtgtgtgagtgtgt--gtgtgtga 451
||||||||||||| ||||||||||||| ||||||||
Sbjct: 77 cttgtatgtatgtatgtgtgagtgtgtatgtgtgtga 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
