TCATAATTTGCGGCGCTATACGACTCCTATTCGGAGAGATCCGCGGAATT
CCCAGATACTGAAAAAGTCATAGGGAAACATTATTTTATGTTTATTTAAA
GTACATATTATATGAGTGTATGTGGGTACATACATAAGTGATTGAAATAA
AGTTAAGCGTAAGCTGATAATGCTCCCCCCAAGAGCCAGAGACTAGCAGA
AAGCCCTGTAGCAGGCATGGGAAACGTCCCTTCACATTTTATGATCAGAG
AAGAAAGCCCTGTAGCAGGCATGGGAAACGTCCCTTCACATTTTATGATC
AGAGAAGTCCAAGAGACTGCCAAAACAATACAGGCAATTGCTATAGCTCT
TGTTTGCTGCCCAGAACTTGAAGGTAAGACCTTATTTGTAAAGACACCTT
GCAATTCTAAGAGAACTTGGAGAAACAGAGTTTGGTCTAGTCTGAAAGCT
ACCTCCTTGAGTTTTTATTATCAGAAAGTGCCATGCAAGCTGCCAAAGGA
GAGGAGCAATCAGTTGTTCTACCCAACTGTAAAGGATATTAAAAAGGTAC
AAATATGAAAAAAAAAGAAATCAAATCATCCCTATTCACAAAACTATGTA
TTATACATAAGGGGTCTCCTCAAATCGAAAAATCTACTTACAAAAATCAG
TAGCCACGTGTCTTTGTTAGAGTTACTATTGCTACGATGAAGT

NACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTCCTACTGAGTGGGCTTTAAATC
CCACTAGATTTTGGCTACCTCCAAGGTATAAGTGCCACTAATACACCCTT
GGAGATATCCTGCAATGCTGACAATTGTTGTGTTTCATGAGCTTAACAGC
TGGGGATACTGTTGCTTGCTTTTTCTCCTTTGACATCTTCAATAGCACTA
ATCAATACTAAAAGAGTCATTCTTCAGGGAGAAGCCTTCCAAGACAATAC
ACCTGGATTCCTCCTAGTCCTATGTCAAATGTCCCTGGAGTCTTCAGCAA
TAGGGTCTTACCTTTGACTTCTAGAAGGCACAAAAGGACAAAGGAAATAG
ATTATATTATTTGGGGATCATTTTGACTTCTTTAACAACTCAAGGGCTAA
TTCCCCATTCTGGCAGTGAATTGTTTCATTTTTGGTTTTGCTTTTAAGAT
AGTCTATAGCTCTTGTGTGGAGGATTATCACTCCAAGTGGTTTAAGTTAA
TTCAATCTTTTCCTGTTTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTAT
GTATACACATACATTTGCATGTATATTATAGATGTATTTTAGTCAAACAA
ATATTACCCTATGACCTTTTTCAAAGATCCT

Query= MSMg01no132_p08.b1 MSMg01no132_p08.b1 CHROMAT_FILE:
MSMg01no132_p08.b1 PHD_FILE: MSMg01no132_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:38 2005
         (632 letters)



>mm_chr2_109201531_109202561
          Length = 1031

 Score =  659 bits (341), Expect = 0.0
 Identities = 356/361 (98%), Gaps = 1/361 (0%)
 Strand = Plus / Minus

                                                                        
Query: 272  ggcaattgctatagctcttgtttgctgcccagaacttgaaggtaagaccttatttgtaaa 331
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 ggcaattgctatagctcttctttgctgcccagaacttgaaggtaagaccttatttgtaaa 972

                                                                        
Query: 332  gacaccttgcaattctaagagaacttggagaaacagagtttggtctagtctgaaagctac 391
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  gacaccttgcaattctaagagaacttggagaaacagagtttggtctagtctgaaagctac 912

                                                                        
Query: 392  ctccttgagtttttattatcagaaagtgccatgcaagctgccaaaggagaggagcaatca 451
            ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 911  ctccttgagttttcattatcagaaggtgccatgcaagctgccaaaggagaggagcaatca 852

                                                                        
Query: 452  gttgttctacccaactgtaaaggatattaaaaaggtacaaatatgaaaaaaaaagaaatc 511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  gttgttctacccaactgtaaaggatattaaaaaggtacaaatatgaaaaaaaaagaaatc 792

                                                                        
Query: 512  aaatcatccctattcacaaaactatgtattatacataaggggtctcctcaaatcgaaaaa 571
            ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 791  aaatcatccctattcac-aaactatgtattatacataaggggtctccccaaatcgaaaaa 733

                                                                        
Query: 572  tctacttacaaaaatcagtagccacgtgtctttgttagagttactattgctacgatgaag 631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732  tctacttacaaaaatcagtagccacgtgtctttgttagagttactattgctacgatgaag 673

             
Query: 632  t 632
            |
Sbjct: 672  t 672


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1031
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1021
Effective search space:   635062
Effective search space used:   635062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)