Query= MSMg01no137_p18.b1 MSMg01no137_p18.b1 CHROMAT_FILE:
MSMg01no137_p18.b1 PHD_FILE: MSMg01no137_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:52 2005
(690 letters)
>mm_chr2_181006354_181007443
Length = 1090
Score = 1166 bits (603), Expect = 0.0
Identities = 622/629 (98%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 62 ccagccagggctatttaaaacagcgattcttagtcatcctaattctgaataactttaaca 121
||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 264 ccagccaggactatttaaaacagtgattcttagtcatcctaattctgaataac--taaca 321
Query: 122 tagttcctcagatgtggtggccccacataaaactattttcagtgctacctcataactaaa 181
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagtttctcagatgtggtgaccccacataaaactattttcagtgctacctcataactaaa 381
Query: 182 attttgctactattatgagttataatgtaaatatctgatatgtaggatatctgatataca 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 attttgctactattatgagttataatgtaaatatctgttatgtaggatatctgatataca 441
Query: 242 acccccatgaaagggtcattcgactccttaaagagtctcaacccacaggttgaaaaactc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acccccatgaaagggtcattcgactccttaaagagtctcaacccacaggttgaaaaactc 501
Query: 302 tgattaagacaaactgtctcaaaacaacaacaaagaattactctgatctgaacagtaata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgattaagacaaactgtctcaaaacaacaacaaagaattactctgatctgaacagtaata 561
Query: 362 ttaagtgggaacacccggactccaagaagtctacaggaacttggaaaggaagctatcctc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttaagtgggaacacccggactccaagaagtctacaggaacttggaaaggaagctatcctc 621
Query: 422 cctcctcagccagaactttggataaagcaaaggacaatgacagaactaaaattacacctt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cctcctcagccagaactttggataaagcaaaggacaatgacagaactaaaattacacctt 681
Query: 482 gtccaaaacaaattcttccaaggaaggaagtcaggagagggtgtggggaaaatagaccca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gtccaaaacaaattcttccaaggaaggaagtcaggagagggtgtggggaaaatagaccca 741
Query: 542 aaaccttcagttgtgctatttaggaagagtctacagctcctgactctctctctctctccc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 aaaccttcagttgtgctatttaggaagagtctacagctcctgactctctctctctctccc 801
Query: 602 cctttctttttttaatagcatgcagcaagagttaagtctcattttccaattagtagtata 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cctttctttttttaatagcatgcagcaagagttaagtctcattttccaattagtagtata 861
Query: 662 atggaaactcttcccattagaaatgcaaa 690
|||||||||||||||||||||||||||||
Sbjct: 862 atggaaactcttcccattagaaatgcaaa 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_p18.g1 MSMg01no137_p18.g1 CHROMAT_FILE:
MSMg01no137_p18.g1 PHD_FILE: MSMg01no137_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:52 2005
(237 letters)
>mm_chr2_181157408_181158044
Length = 637
Score = 458 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Minus
Query: 1 gaactcactctgtataccaggctggcctcaagctcagagatccacttgcctctgcctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaactcactctgtataccaggctggcctcaagctcagagatccacttgcctctgcctcct 474
Query: 61 aaattctggaattaaaggtgtgtgctgccaccgcccatggtcaccttctaacgccatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aaattctggaattaaaggtgtgtgctgccaccgcccatggtcaccttctaacgccatgaa 414
Query: 121 ttagtatgactgcagggagcatgctctgcataactcaaaggctaagatgactttgggtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttagtatgactgcagggagcatgctctgcataactcaaaggctaagatgactttgggtcc 354
Query: 181 ctaacgaccctggtgtatccttcacatcaatacagctctagcatgcagaagctgcct 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctaacgaccctggtgtatccttcacatcaatacagctctagcatgcagaagctgcct 297
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
