Query= MSMg01no138_m12.b1 MSMg01no138_m12.b1 CHROMAT_FILE:
MSMg01no138_m12.b1 PHD_FILE: MSMg01no138_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:55 2005
(366 letters)
>mm_chr2_84700900_84701665
Length = 766
Score = 659 bits (341), Expect = 0.0
Identities = 359/365 (98%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 3 ggaattcactctgtat-ccaggctggctttgaacttagagacctgtgtgcttctccctcc 61
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcactctgtagaccaggctggctttgaacttagagacctgtgtgcttctccctcc 261
Query: 62 cgagggtcagaatgaagagcatgcaccactatgcctacatgcctactctgcttttaacat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgagggtcagaatgaagagcatgcaccactatgcctacatgcctactctgcttttaacat 321
Query: 122 gggctggattactaattatctagctgtccttttagcatggccacctctggccacctcatc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gggctggattactaattatctagctgtccttttagcatggccacctctggccacctcatc 381
Query: 182 tccatttgcaagaccttgcagttctccacttctctgtgacaatggccacacaggcagtgg 241
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 382 tccatttgcaagaccttgcagttctccacttctctgtgacaatgaccacacaggcagtgg 441
Query: 242 gtgactgaacccagcctgctggctctgaagtgttatataactttgagggcagggaccaga 301
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 442 gtgactgaacccagcctgctggctctgaagtggcatataactttgagggcagggaccaga 501
Query: 302 ggctacatgcagagtctgaactcttcaaggaacaatcctcctggccaacacagtgatatc 361
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggctacatgcagagtctgaattcttcaaggaacaatcctcctggccaacacagtgatatc 561
Query: 362 tgggg 366
|||||
Sbjct: 562 tgggg 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_m12.g1 MSMg01no138_m12.g1 CHROMAT_FILE:
MSMg01no138_m12.g1 PHD_FILE: MSMg01no138_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:55 2005
(433 letters)
>mm_chr2_84861455_84862287
Length = 833
Score = 783 bits (405), Expect = 0.0
Identities = 426/433 (98%)
Strand = Plus / Minus
Query: 1 actcattggaaaccctcagccctgacttggcacaggggagacctcatatttggccctttt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 633 actcattggaaaccctcagccctgacttggcacaagggagacctcatatttggccctttt 574
Query: 61 ttcagggtggagttctgggcattaagatcggctgggtgtgtgatctggacaaggcctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttcagggtggagttctgggcattaagatcggctgggtgtgtgatctggacaaggcctggg 514
Query: 121 accagtgcatccccaaatattccttcactcggctagatggagtttctgagaaaagcagtg 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 accagtgcattcccaaatattccttcactcggctagatggagtttctgagaaaagcagtg 454
Query: 181 tttcccctggctacaacttcaggtaaaccccactcctgagcagaagtagaggacacaggc 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 453 tttcccctggctacaacttcaggtaaaccccactcctaagcagaagtagaggacacaggc 394
Query: 241 agccccattgaaattcgtctcaggcaaaagtgcacaatcggaaggaaactcctcgtgtcc 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agccccaaaaaaattcgtctcaggcaaaagtgcacaatcggaaggaaactcctcgtgtcc 334
Query: 301 ttctgctgcctgtcaggcttcagttccagcttgcgaaggacttcttgacagccattcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 333 ttctgctgcctgtcaggcttcagttccagcttgcgaaggacttcttgacagccgttcctg 274
Query: 361 gtgggtgggttgtgctatgaggtttggattcatgtctttaaaaatgatccaactaagaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gtgggtgggttgtgctatgaggtttggattcatgtctttaaaaatgatccaactaagaaa 214
Query: 421 tctgctgaggtag 433
|||||||||||||
Sbjct: 213 tctgctgaggtag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
