Query= MSMg01no141_d06.b1 MSMg01no141_d06.b1 CHROMAT_FILE:
MSMg01no141_d06.b1 PHD_FILE: MSMg01no141_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:20 2005
(673 letters)
>mm_chr2_89832666_89833737
Length = 1072
Score = 1224 bits (633), Expect = 0.0
Identities = 664/675 (98%), Gaps = 5/675 (0%)
Strand = Plus / Minus
Query: 1 tagttcaggttctgtggatatgatcatccct-t-aaacaagagaatatccaccgtgatat 58
||||||||||||||||||||||||||| || | ||||||||||||||||| |||||||
Sbjct: 872 tagttcaggttctgtggatatgatcat--ctgtaaaacaagagaatatcca-tgtgatat 816
Query: 59 tttaaactctaagctaaagtattttgtgatctcattgttggaatgtctgaaacaatgaaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 tttaaactctaagctaaagtattttgtgatctcattgttggaatgtctgaaacaatgaaa 756
Query: 119 aatccctacattcttacttcttcaattaagatcactgtgcaggtaattttgaagaggaga 178
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 755 aaaccctacattcttacttcttcaattaagatcactgtgcaggtaattttgaagatgaga 696
Query: 179 agtagattggcttactactaatactttattgtaatagttcaaccaaccaaagtcttttat 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agtagattggcttactactaatactttattgtaatagttcaaccaaccaaagtcttttat 636
Query: 239 gcttattggctgatgatttactgccagttattttttaaaattaaatccaggggataatct 298
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 635 gcttattggctgatgatttactgccaattattttttaaaattaaatccaggggataatct 576
Query: 299 caaataggactttctttcagtgctggttttagttcttataggacaaatatcatgaatctc 358
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 575 caaataggactttctttcagtgctgggtttagttcttataggacaaatatcatgaatctc 516
Query: 359 aatttgtttgaaattacatttgtgcatgattgtgactgttaaaggtctatgaactcagtg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aatttgtttgaaattacatttgtgcatgattgtgactgttaaaggtctatgaactcagtg 456
Query: 419 tgcatgaaagtaagtgagacactaaagaactaaagcttgaagcctcactcaatgtaaagg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgcatgaaagtaagtgagacactaaagaactaaagcttgaagcctcactcaatgtaaagg 396
Query: 479 tctgtgttatgtatgtatcattcctttgtatcataggatgcacatgaacccagggacaga 538
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 395 tctgtgttatgtatgtatcattcctctgtatcataggatgcacatgaacccagggacaga 336
Query: 539 gacagaattacagagttattatggaaaataaaagaacatttgtgcttatatctcattgag 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gacagaattacagagttattatggaaaataaaagaacatttgtgcttatatctcattgag 276
Query: 599 tatgattaattctagaacagcagctctgtgccaggcttctcgtggttccttctttcatga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tatgattaattctagaacagcagctctgtgccaggcttctcgtggttccttctttcatga 216
Query: 659 tcctttcatgatttc 673
|||||||||||||||
Sbjct: 215 tcctttcatgatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1072
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1062
Effective search space: 704106
Effective search space used: 704106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_d06.g1 MSMg01no141_d06.g1 CHROMAT_FILE:
MSMg01no141_d06.g1 PHD_FILE: MSMg01no141_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:20 2005
(687 letters)
>mm_chr2_89688239_89689325
Length = 1087
Score = 1251 bits (647), Expect = 0.0
Identities = 677/687 (98%)
Strand = Plus / Plus
Query: 1 gttggtaatcaacttgcagtcagaaccttcatcatttatctctccagcttttcttcagtg 60
||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct: 201 gttggtaatcaacttgcagtcagaaccttgatcatttctctctccagtttttcttcagtg 260
Query: 61 aatgttatttaaatgtgactgcagtgtgagtaatcagctgcttttggttagagctcaggc 120
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 261 aatgttatttaaatgtgactgcggtgtgagaaatcagctgcttttggttagagctcaggc 320
Query: 121 tggcttctcacaggagaagcaggaataaggattgttattgtgaccgactgacattgtcag 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggcttctcacaggagaagcgggaataaggattgttattgtgaccgactgacattgtcag 380
Query: 181 cttgactaataatacaggtctggggaaggaagatagtagtgccatgtgaaaaacttataa 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgactaataatacaggtctggagaaggaagatagtagtgccatgtgaaaaacttataa 440
Query: 241 ataatggataaataaaatgacacagaagcaaactgtctaaatacctatattcatgctcat 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatggataaataaaaagacacagaagcaaactgtctaaatacctatattcatgctcat 500
Query: 301 agacaaaagtggtccctggttgttgtttttttccattaattaatttatttattcactttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacaaaagtggtccctggttgttgtttttttccattaattaatttatttattcactttg 560
Query: 361 cagcctgatcccagccccagctccttcctctcttccctgtcccacctttacaagttcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 cagcctgatcccagccccagctccttcctctcttccctgtcccacctttacaaattcctc 620
Query: 421 cccccattgcctccttcccttctcatcagagaaaggaaaacccccttgagtaccaccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccccattgcctccttcccttctcatcagagaaaggaaaacccccttgagtaccaccctt 680
Query: 481 ccctgacacatctagtcccaggaggactaagcacatcctctcccactcaggtctaaccag 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctgacacatctagtcccagcaggactaagcacatcctctcccactcaggtctaaccag 740
Query: 541 gaagtccagttaggagaagagaatccaatggcaggcaacggagtcagagacaaaccctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagtccagttaggagaagagaatccaatggcaggcaacggagtcagagacaaaccctgc 800
Query: 601 tccaattgttaggggacccacatgaagcccaagctacacatctgcaacacctgtgtagtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tccaattgttaggggacccacatgaagcccaagctacacatctgcaacacctgtgtagtg 860
Query: 661 ggggcctaagtccagcacctgcatgtt 687
|||||||||||||||||||||||||||
Sbjct: 861 ggggcctaagtccagcacctgcatgtt 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
