Query= MSMg01no141_d19.b1 MSMg01no141_d19.b1 CHROMAT_FILE:
MSMg01no141_d19.b1 PHD_FILE: MSMg01no141_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:24 2005
(690 letters)
>mm_chr2_74453843_74454932
Length = 1090
Score = 1197 bits (619), Expect = 0.0
Identities = 672/695 (96%), Gaps = 11/695 (1%)
Strand = Plus / Plus
Query: 1 gatgcaaaaacaacgcagtggcttgaa-----ccttttaaatttccctggcctcctattc 55
||||||||||||| ||||||||||||| ||| ||||||||||||||||||||
Sbjct: 201 gatgcaaaaacaatgcagtggcttgaaaatggcct-----atttccctggcctcctattc 255
Query: 56 caaggtgaacattctacatcaacctacactgctccatcatccagggaccccactgtccct 115
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 256 caaggtgaacattctacatcaagatacactgctccatcatccagggaccccactgtccct 315
Query: 116 gtcatttgtatcagtgttctgaaggttcttgttattatctctccacctgagcttcagcca 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gtcatttgtatcagtgttctgaaggttcttgttattatctctccacctgagcttcagcca 375
Query: 176 tcatggtggagagacacagtccctataggcttgctaacttgcctttgcaatggcttttcc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tcatggtggagagacacagtccctataggcttgctaacttgcctttgcaatggcttttcc 435
Query: 236 ctccttgtctgcttctgctttcaacagcaaacgtcagactgttttttaaagatgtccttg 295
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctccttgcctgcttctgctttcaacagcaaacgtcagactgttttttaaagatgtccttg 495
Query: 296 gagcactgaattccattttgccaatcttgtaaggtaacaggaatttactttcctccattt 355
|||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct: 496 gagcactgaattccattttgccaaccctggaaggtaacaggaatttactttcctccattt 555
Query: 356 cacattgcctcgaggcagatgaagaaacaggctcttctctaatcaggacagttctgggcc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 cacattgcctcgaggcagatgaagaaacaggctcttctctaatcaggacagttctgggcc 615
Query: 416 taacttacttcccagaaatgagccccacagggggcagggggcagggtgtggaggctaaag 475
|||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 616 taacttacttcccagaaatgagccccacagggggcaggggtcggggtggggaggctaaag 675
Query: 476 acacctatgaaggattcatcatacttttctgtctcctcttcctgtgatattttccacatt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 acacctatgaaggattcatcatacttttctgtctcctcttcctgtgatattttccacatt 735
Query: 536 ccctgactgtttccctgaccccaggagaaggtttttttctttgcagtgctgagaagtgaa 595
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 736 ccctgactgtttccctgaccccaggagaaggtttttttctttgcaatgctgagaagtgaa 795
Query: 596 tctggaaccttgggcatataaagcaaatactttgccactgaggtacccatggtcccagaa 655
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 796 tctggaaccttgggcatatagagcaaatactttgccactgaggtacccatggtcccagaa 855
Query: 656 ggacttttttttttcttttgtattttatgttatga 690
||||||||||||| |||||||||||||||||||||
Sbjct: 856 ggacttttttttt-cttttgtattttatgttatga 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no141_d19.g1 MSMg01no141_d19.g1 CHROMAT_FILE:
MSMg01no141_d19.g1 PHD_FILE: MSMg01no141_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:25 2005
(689 letters)
>mm_chr2_74621407_74622494
Length = 1088
Score = 542 bits (280), Expect = e-158
Identities = 298/304 (98%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 1 ttaaattttcataaggaaaggaggccttacgtagtcttaaaagtatgccgtaatgaaggt 60
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||
Sbjct: 303 ttaaattttcataaggaaaggaggccttaggtagtcttaaaagtatg-tgtaatgagggt 245
Query: 61 gagacatagcactcctgagaggacccccagacacttagagaccctgagaaccactaagtg 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 gagacatagcactcctgagaggacccccagacacttagagaccccgagaaccactaagtg 185
Query: 121 gagaaagcaagtgatggggaaatggaagagaaggagaagcagaaggacatgggcacagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gagaaagcaagtgatggggaaatggaagagaaggagaagcagaaggacatgggcacagtg 125
Query: 181 aagagaggcagaactggagacttggtggtagtgaggaacagcctgatgtgagaagccagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aagagaggcagaactggagacttggtggtagtgaggaacagcctgatgtgagaagccagt 65
Query: 241 gatgccacctgagaccatggtgggcgttctgggctgtgctgggtatgtggccctgcagca 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ggtgccacctgagaccatggtgggcgttctgggctgtgctgggtatgtggccctgcagca 5
Query: 301 gcag 304
||||
Sbjct: 4 gcag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1088
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1078
Effective search space: 731962
Effective search space used: 731962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
