CCCACCCTTTNNNNAACACTGGGCGCTAXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGCTAAGAAAGTTATCCCCTTTAAAGCCTGAGTACCTGA
GTTTAACCCCCCAAAACCCCCTTAAAAGTATCATGCATCCTGGCACACAC
TTGTCATCCTAGTACTGAGATGGCATAGACTGGTGAATCGCTAGAGCTCC
CTCACCTACCTGGCAAGCCTGTTTGACAGGTTCTAGGCTAGTGAGTTTCC
ATGTCTCAGAACCCAAAATAGACAGACAGCTCCAGAGGAACAATATCTAC
GGTTATCCTCTGACCTTCACTTCTATGTGCATACCTATATGTGTACATCT
AGAAACACATGTAAATATTTTGTAACAATTTACTTATGTATATGTGGTTT
CAAGATTTGTTATAAAACCTTTAAATGAGATCAAATTATTTCTCAATAAA
TACACTTCAGCTTCTGATTATCATTAACCTGTGAAAAGCTAAGATAGTTC
GATCCAAATTGAAAGTATTTCATAAAGTTTCAAATTGCTAAAACACCTTT
CAAGAATCTGCATACTTGAAAAATCATATTTTAGATAAATCACCAGAGAA
ATGTTTTCTTTATAACGTTGAAATAACCAACTTAATTTTAAATCATAATT
GCAACTAGTAAACTCAAATTTCATGTCCATATTTCTAATTTAAAATTTCT
CATCAGATAATAAATGTCCTGTCCTCCAGCTGTATGCTGTGACCCTGCAT
ATGGACTGGAGTGAAGGATGTTCTATGATCAAGAGGCATTCTTCCTGGAA
GAACAATTTAGATGCCCTTTATAAAGATGAGAGTAGTGTGTGTTGGTTCT
TCTTATCCCAATGAAATCTATCATATTTGTTCCAGGTGTCTTTATACTTT
CCTCCAGAAACTTTTATTAATAATTATTGATTCTACCTTTCTTTGTAAAC
TTTCTCTTTTTATTTCTTAAAAATTGCTTCTTTTAGCTTTCCTTCTCTTC
CTTATTCTTTTTACTATCATTTCTCATCTTGTCTTTCTTGTTTATCTCTT
TTTCTTTTTTCTTATTATTT

NCCCCACCCTTNTTTNTAAGATGTGAGGCTGGGGXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCTTTATGCCTCAAGCTA
TTTCACAAAATGGAAACAAAAGTGCTCTACCCAATTCATTCTACAAAGCC
ACAATTACTCTTATACCTAAGCCACATAAAAACCCAACAAAAATAGAGAA
CTTCAGACCAATTTCCCTTATGAATATTGATGCAAAAATACTCAATAAAA
TTCTCGAACACCAAATCCAAGGAAACAACAAAAAGATCATCCATGAAGTA
GGTTTCATTCCAGGGATGAAGAGATGGTTTAATATATGGAAATCCATCAA
CGTAATCCACTGTATAAACAAACTCAAAGACCAAAACCACATGATGATCT
CTTTAGATACTGAGAAAGCATTTGACAAAATCCAGCACATACTCATAATA
AAAATCTTGGAAAGATCAGGAATTCAAGGTGCATACCTAAACATAATAAA
AGCAATATATAGCAAACCAGTAGCCAACAGCAAAGTAAATGGAGAGAAGC
TTGAAGCAATCTCACTAAAATCAGGGACTAGACAAGGCTGTCCACTTTTT
CCCTACCTATTCAATATAGTACTCGAAGTCCTAGCTAGAGCAATTAGACA
AAAAAGGAGATCAAGTGTATACAAATTGGAAAGGAAGAACTCAAAATATC
ACTATTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCTA
CCAGAGAACTCCTAAACCGGATAAACAACTTCAGTGAAGTAGCTGGATAT
AAAATTAACTCAAACAAATCAGTGGCCTTTTTCTACACAAAGGATAAACA
GGCTGAGAAAGAAATTCGGGAAATAACACCCTTCACAATAGTCGCAAATA
ATATAAAATACCTAGGTGTGACTTGTCTGTATGAAAAGGACTTCAAGGCT
CTGAAGAAAGAATTCAAAGAAGAATCTGGCAAAGAATGAAAAGACCTCCC
ATACTCTTGGATTGGGCAGGAATAAAATAGTAAAAATGGGTAATCTTGTC
TAAGGCAATCCAAACCTTTTATGGGGGGCCCCCATTCAAATTTCCAACTT
CAACTTTTTCATGAAATTAAAAAGGGGCAATTTTAAAAATATCTTCCGGG
GGAAATCCAAAAAACCTCTGGATGTGTAAAAACTTATTTCTTAAAAAATA
AAGA

Query= MSMg01no141_g03.b1 MSMg01no141_g03.b1 CHROMAT_FILE:
MSMg01no141_g03.b1 PHD_FILE: MSMg01no141_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:59:43 2005
         (704 letters)



>mm_chr2_16613110_16614213
          Length = 1104

 Score = 1181 bits (611), Expect = 0.0
 Identities = 683/713 (95%), Gaps = 13/713 (1%)
 Strand = Plus / Plus

                                                                       
Query: 3   acctgagtttaacccccca--aaacccccttaaaagtatcatgcatcctggcacacactt 60
           ||||||||||||||||||   |||||| | |||  ||||||||||| |||||||||||||
Sbjct: 194 acctgagtttaacccccccctaaacccacataa--gtatcatgcatgctggcacacactt 251

                                                                       
Query: 61  gtcatcctagtactgagatggcatagactggtgaatcg--------ctagagctccctca 112
           |||||||||||||||||||||||||||| |||||||||        ||||||||||||||
Sbjct: 252 gtcatcctagtactgagatggcatagaccggtgaatcggtgaattgctagagctccctca 311

                                                                       
Query: 113 ccta-cctggcaagcctgtttgacaggttctaggctagtgagtttccatgtctcagaacc 171
           |||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 312 cctagccaggcaagcctgtttgacaggttctaggctagtgagtttccatgtctcaaaacc 371

                                                                       
Query: 172 caaaatagacagacagctccagaggaacaatatctacggttatcctctgaccttcacttc 231
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 372 caaaatagacagacaactccagagaaacaatatctacggttatcctctgaccttcacttc 431

                                                                       
Query: 232 tatgtgcatacctatatgtgtacatctagaaacacatgtaaatattttgtaacaatttac 291
           | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgtgtgcatatctatatgtgtacatctagaaacacatgtaaatattttgtaacaatttac 491

                                                                       
Query: 292 ttatgtatatgtggtttcaagatttgttataaaacctttaaatgagatcaaattatttct 351
           ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||
Sbjct: 492 ttatgtatatgtggtttcaagaaatgttataaaacttttaaatgagatcaaattatttct 551

                                                                       
Query: 352 caataaatacacttcagcttctgattatcattaacctgtgaaaagctaagatagttcgat 411
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 552 caataaatacacttcagcttctgattatcattaacccgtgaaaagctaagatagttcgat 611

                                                                       
Query: 412 ccaaattgaaagtatttcataaagtttcaaattgctaaaacacctttcaagaatctgcat 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ccaaattgaaagtatttcataaagtttcaaattgctaaaacacctttcaagaatctgcat 671

                                                                       
Query: 472 acttgaaaaatcatattttagataaatcaccagagaaatgttttctttataacgttgaaa 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 acttgaaaaatcatattttagataaatcaccagagaaatgttttctttataacgttgaaa 731

                                                                       
Query: 532 taaccaacttaattttaaatcataattgcaactagtaaactcaaatttcatgtccatatt 591
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 732 taaccaacttaattttaaatcgtaattgcaactagtaaactcaaatttcatgtccatatt 791

                                                                       
Query: 592 tctaatttaaaatttctcatcagataataaatgtcctgtcctccagctgtatgctgtgac 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 tctaatttaaaatttctcatcagataataaatgtcctgtcctccagctgtatgctgtgac 851

                                                                
Query: 652 cctgcatatggactggagtgaaggatgttctatgatcaagaggcattcttcct 704
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 cctgaatatggactggagtgaaggatgttctatgatcaagaggcattcttcct 904


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space:   759236
Effective search space used:   759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)