Query= MSMg01no142_l10.b1 MSMg01no142_l10.b1 CHROMAT_FILE:
MSMg01no142_l10.b1 PHD_FILE: MSMg01no142_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:44 2005
(568 letters)
>mm_chr2_87641744_87642711
Length = 968
Score = 1050 bits (543), Expect = 0.0
Identities = 561/567 (98%)
Strand = Plus / Minus
Query: 1 tataggtattgccttctggatatcaacaatgcacctacaacacagaatataattggcttc 60
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 767 tataggtattgccttctggatatcaacaatgcccctacaacacagaacataattggcttc 708
Query: 61 aggtattattattctaaaagtaagtcataagtcagtttaaagatccatagctttttagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aggtattattattctaaaagtaagtcataagtcagtttaaagatccatagctttttagtt 648
Query: 121 gtaagattgttaaagctaacatctcagctagactgtttagaaaatttgattaaatttccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gtaagattgttaaagctaacatctcagctagactgtttagaaaatttgattaaatttccg 588
Query: 181 tgtcattcatgaagcatgctgctttctacaaattccataatttctgtgagtcaaatttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tgtcattcatgaagcatgctgctttctacaaattccataatttctgtgagtcaaatttcc 528
Query: 241 taggtatggagtatacttatctcaaggatttttttgaaattcaaaatgacatcaaagaaa 300
| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 527 ttggtatggagtatacttatctcaaggaaatatttgaaattcaaaatgacatcaaagaaa 468
Query: 301 tctggcattagagccagtgtaatcgagcttattctgtgctttggagtattcatgtgacac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tctggcattagagccagtgtaatcgagcttattctgtgctttggagtattcatgtgacac 408
Query: 361 aggaggatctcattgtctcttaaatgaatcatggtggatttgaaacgaattttaatcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aggaggatctcattgtctcttaaatgaatcatggtggatttgaaacgaattttaatcagt 348
Query: 421 tatagaagtatagactaggcaattgaataatgttaaaaggcgtctattttactacacttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tatagaagtatagactaggcaattgaataatgttaaaaggcgtctattttactacacttg 288
Query: 481 atccaggtttcctctggaaaactgtgtggttagtaatacacagtcattctttcctatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atccaggtttcctctggaaaactgtgtggttagtaatacacagtcattctttcctatttg 228
Query: 541 tagcagtcaagagtctactactgataa 567
|||||||||||||||||||||||||||
Sbjct: 227 tagcagtcaagagtctactactgataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_l10.g1 MSMg01no142_l10.g1 CHROMAT_FILE:
MSMg01no142_l10.g1 PHD_FILE: MSMg01no142_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:44 2005
(369 letters)
>mm_chr2_87482409_87483174
Length = 766
Score = 613 bits (317), Expect = e-180
Identities = 347/357 (97%), Gaps = 3/357 (0%)
Strand = Plus / Plus
Query: 13 tgcataagaatgcataatgttcttttaagttcagtttatatcatatacatcacttctctt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgcataagaatgcataatgttcttttaagttcagtttatatcatatacatcacttctctt 272
Query: 73 actccttaatttagctcatgttctaggtgatccaacactatcatttggaatgaagggcac 132
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 actccttaatttagctcaggttctaggtgatccaacactatcatttggaatgaagggcac 332
Query: 133 tactggtatctccctccaacataattaaaagtaaaataattcctttgaattatttgctga 192
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tactgatatctccctccaacataattaaaagtaaaataattcctttgaattatttgctga 392
Query: 193 cttggcaatttgggtcacagtgacttttattgcagttaaaatacttatttatagataatt 252
|||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 393 cttggcaatttgtgttgcagtgatttttattgcagttaaaatacttatttatagataatt 452
Query: 253 aatccataaacactaactttattactatgctataaaataaatatttaaatgaatcctgag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 aatccataaacactaactttattactatgctataaaataaatatttaaatgaatcctgag 512
Query: 313 attgaagagaaataactactatatagtgtatactcaattggacatatttcctaaatt 369
||||||||||||||||||| ||| | |||||| ||||||||||||||||||||||||
Sbjct: 513 attgaagagaaataactac-ata-a-tgtatattcaattggacatatttcctaaatt 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 766
Length adjustment: 9
Effective length of query: 360
Effective length of database: 757
Effective search space: 272520
Effective search space used: 272520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
