Query= MSMg01no143_d14.b1 MSMg01no143_d14.b1 CHROMAT_FILE:
MSMg01no143_d14.b1 PHD_FILE: MSMg01no143_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:43 2005
(358 letters)
>mm_chr2_151371427_151372184
Length = 758
Score = 625 bits (323), Expect = 0.0
Identities = 348/357 (97%), Gaps = 4/357 (1%)
Strand = Plus / Plus
Query: 5 ggaattc--ttttttttctttttccctctt-aaatatagctagacatcttgtccttggga 61
||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 203 ggaattctttttttttttttttttcctcttaaaatatagctagacatcttgtccttggga 262
Query: 62 ttgtgcttaaagtcttacgtagcctcttggtgtctgatggagaagctaagagtcccttgg 121
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttgtgctt-aagtcttacatagcctcttggtgtctgatggagaagctaagagtcccttgg 321
Query: 122 catcatctccagtctgcctagggcagtcaaagctcccaggccagggctggcccatgactt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catcatctccagtctgcctagggcagtcaaagctcccaggccagggctggcccatgactt 381
Query: 182 tgaatttttctttagttttcgtccctcttctctgctgttccttagttggtgaactgatgt 241
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 382 tgaatttttctttagttttcgtccctcttctctgctgttccttagttggtgacctgatgt 441
Query: 242 ctggagggaagctcatatttaagaaatgcctcaggtggtattttttctagtgtgtagtgt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctggagggaagctcatatttaagaaatgcctcaggtggtattttttctagtgtgtagtgt 501
Query: 302 ctgtcacaaaataggctgagctgtatgggtagttgtgacaatgttttattgttgttg 358
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 ctgtcacaaaataggctgagctgtatgggtagttgtgacaatgttttgttgttgttg 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_d14.g1 MSMg01no143_d14.g1 CHROMAT_FILE:
MSMg01no143_d14.g1 PHD_FILE: MSMg01no143_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:43 2005
(440 letters)
>mm_chr2_151526346_151527185
Length = 840
Score = 793 bits (410), Expect = 0.0
Identities = 430/440 (97%), Gaps = 6/440 (1%)
Strand = Plus / Minus
Query: 1 catgagatcccagccattagagtgcccacagttccctccctgccctgtatagtcctgcct 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 641 catgagatcccagccattagagtgtccacagttccctccctgccctgtatagtcctgcct 582
Query: 61 cgcagcacatcctcagtggtcactctcttcactcacttccctcaagtctttgctcacatg 120
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 581 tgcagcacatcctcagtggtcactctcttccctcacttccctcaagtctttgctcacatg 522
Query: 121 tcaccttctcagaaccacctgcctgggccatcttcttaaaaagagtagcgctctggcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tcaccttctcagaaccacctgcctgggccatcttcttaaaaagagtagcgctctggcacc 462
Query: 181 ctgcttgccttcactcagaacttctcactagggcattcatcagctcctgatagtgtattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctgcttgccttcactcagaacttctcactagggcattcatcagctcctgatagtgtattt 402
Query: 241 ctttgctcagtatcatttctgcttaaaaataagtaacacgctgggtagcagtgatgcagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctttgctcagtatcatttctgcttaaaaataagtaacacgctgggtagcagtgatgcagg 342
Query: 301 cctttaaattccagcacttgggaggcagaggcgggtgaatttctgagttggaggccagcc 360
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 341 cctttaaattccagcacttgggaggca------ggtgaatttctgagttggaggccagcc 288
Query: 361 tgttctacagagtgagttccaggacagccagggctgcacagagaaaccctgtctggaaaa 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggtctacagagtgagttccaggacagccagggctgcacagagaaaccctgtctggaaaa 228
Query: 421 ccaaaatcaaaactaagaaa 440
||||||||||||||||||||
Sbjct: 227 ccaaaatcaaaactaagaaa 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
