Query= MSMg01no143_m10.b1 MSMg01no143_m10.b1 CHROMAT_FILE:
MSMg01no143_m10.b1 PHD_FILE: MSMg01no143_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(244 letters)
>mm_chr2_63228251_63228894
Length = 644
Score = 470 bits (243), Expect = e-137
Identities = 243/243 (100%)
Strand = Plus / Minus
Query: 1 tgtctttaattatgaaatgaacctataattattttgtaatagtacagtgacattaaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgtctttaattatgaaatgaacctataattattttgtaatagtacagtgacattaaatga 243
Query: 61 gctaatactggttaagtatgtgtaagaattaagtgaataaataaggaaataatcattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gctaatactggttaagtatgtgtaagaattaagtgaataaataaggaaataatcattaac 183
Query: 121 ccccacccagctacagtgtcttggaatcacaacaatggccagaagtcaatcccgcactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ccccacccagctacagtgtcttggaatcacaacaatggccagaagtcaatcccgcactgc 123
Query: 181 agtaactgtacatatgggttggtggcaagcagctttctagttgaacttaagatctgttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 agtaactgtacatatgggttggtggcaagcagctttctagttgaacttaagatctgttct 63
Query: 241 tca 243
|||
Sbjct: 62 tca 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no143_m10.g1 MSMg01no143_m10.g1 CHROMAT_FILE:
MSMg01no143_m10.g1 PHD_FILE: MSMg01no143_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:25 2005
(342 letters)
>mm_chr2_63181094_63181836
Length = 743
Score = 646 bits (334), Expect = 0.0
Identities = 340/342 (99%), Gaps = 1/342 (0%)
Strand = Plus / Plus
Query: 1 atttggacccatgtagtccttggtcatgaggcttctttattgctatttca-tatacttag 59
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atttggacccatgcagtccttggtcatgaggcttctttattgctatttcaatatacttag 260
Query: 60 tttttgtaggtccatttaaattatttatctcttcttggtttaattttagcaagacttgtc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttgtaggtccatttaaattatttatctcttcttggtttaattttagcaagacttgtc 320
Query: 120 tttctgctttcccagttctctctttttatagtgtttgagtccctaaggagtccaataaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgctttcccagttctctctttttatagtgtttgagtccctaaggagtccaataaga 380
Query: 180 caaaagaaggaacactacaaaaagacaaaaaaatcacattgtctttatttgcagacactg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaagaaggaacactacaaaaagacaaaaaaatcacattgtctttatttgcagacactg 440
Query: 240 tgatattatatgtaagagatctcaaaaacttcactagaaacattgaaatgatgaaaactt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatattatatgtaagagatctcaaaaacttcactagaaacattgaaatgatgaaaactt 500
Query: 300 cagaaaagtgtcagggtataaaatcaacttacaaaaattaaa 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaaaagtgtcagggtataaaatcaacttacaaaaattaaa 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
