Query= MSMg01no143_n24.b1 MSMg01no143_n24.b1 CHROMAT_FILE:
MSMg01no143_n24.b1 PHD_FILE: MSMg01no143_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:32 2005
(466 letters)
>mm_chr2_150627086_150627949
Length = 864
Score = 803 bits (415), Expect = 0.0
Identities = 447/459 (97%), Gaps = 4/459 (0%)
Strand = Plus / Plus
Query: 9 ggaattctac-tgttccgcacgctgcagaataccatggtgaacctgggccttcagactgc 67
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ggaattctacatgggccgcacgctgcagaataccatggtgaacctgggccttcagactgc 268
Query: 68 atgcgacgaagccacttatcaggtgtgtttaatctgtcccctgaagagtgaccactgaca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgcgacgaagccacttatcaggtgtgtttaatctgtcccctgaagagtgaccactgaca 328
Query: 128 ttaggacacctgtgccctggagtgttttaccctgtcaggaaggatcatgtcccttcctca 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaggacacctgtgccctggagtgttttaccctgtcaggaaggatcatgtcccttcctca 388
Query: 188 aggggagaacataagactgtaagggatgataataaatggaattattatgagaagactggt 247
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 389 aggggagaacataagactgtaagggatgataataaatggaattat---gagaagactggt 445
Query: 248 ttgagtggtgatgctgtggtttagaagtttctagaaatgtactcccttctcccagtccag 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttgagtggtgatgctgtggtttagaagtttctagaaatgtactcccttctcccagtccag 505
Query: 308 gggtagcttttgaatatgtcatgatctatttggtttccctctctgatcttcagacatcct 367
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 506 gggtaggttttgaatatgtcatgatctatttgatttccctctctgatcttcagacatcct 565
Query: 368 cctgaccccaccgtgctgtgcaggtgtagaagtgcctcctctcatgtaagaagccaactg 427
||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 566 cctgacctcattgtgctgtgcaggtgtagaagtgcctcctctcatggaagaagccaactg 625
Query: 428 ttcaggcattttctttgccttaattttacacaggtcgtt 466
|||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ttcaggcattttctttgccttaattttacacaggtcgtt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 864
Length adjustment: 10
Effective length of query: 456
Effective length of database: 854
Effective search space: 389424
Effective search space used: 389424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_n24.g1 MSMg01no143_n24.g1 CHROMAT_FILE:
MSMg01no143_n24.g1 PHD_FILE: MSMg01no143_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:32 2005
(547 letters)
>mm_chr2_150756674_150757620
Length = 947
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Minus
Query: 1 caaggtcttcctttcccttcccacagcctggtgataaattattatctttacttgacagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 caaggtcttcctttcccttcccacagcctggtgataaattattatctttacttgacagag 415
Query: 61 tggtctagaaacgtattccagaagcattcactaccaaaaacaaccaaagataagctacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tggtctagaaacgtattccagaagcattcactaccaaaaacaaccaaagataagctacca 355
Query: 121 ggagattcccattgtgaaaatagattcaaaccaaagactgtttattttcaattataagag 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggagattcccattgtgaaaacagattcaaaccaaagactgtttattttcaattataagag 295
Query: 181 tacaatattactgtgggaatggaataactagagatataacctgtaacaaaggcttaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tacaatattactgtgggaatggaataactagagatataacctgtaacaaaggcttaagag 235
Query: 241 ctggcagattatgctcctagccaagagttcttggttttgtctttgatttttgttgtcttg 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctggcagcttatgctcctagccaagagttcttggttttgtctttgatttttgttgtcttg 175
Query: 301 tttcttgaggtactagggatgaaactctgggtttctcaaatcctaagcaggtgctctacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tttcttgaggtactagggatgaaactctgggtttctcaaatcctaagcaggtgctctacc 115
Query: 361 aatgagctggaccccagcccatcttggttatgttaatgcatgtctgtcaatttaaaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aatgagctggaccccagcccatcttggttatgttaatgcatgtctgtcaatttaaaacca 55
Query: 421 aggagggggaggtccagtgaggacgtttccttctgtgagttggcttagcttcac 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 aggagggggaggtccagtgaggacgtttccttctgtgagttggcttagcttcac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
