Query= MSMg01no145_m05.b1 MSMg01no145_m05.b1 CHROMAT_FILE:
MSMg01no145_m05.b1 PHD_FILE: MSMg01no145_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:57 2005
(620 letters)
>mm_chr2_157862620_157863640
Length = 1021
Score = 1133 bits (586), Expect = 0.0
Identities = 610/618 (98%), Gaps = 1/618 (0%)
Strand = Plus / Minus
Query: 4 ggaattctagaagtgtg-cactatgcctggcttctgtatggttttaagatgtgcccacat 62
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ggaattctagaagtgtgttactatgcctggcttctgtatggttttaagatgtgcccacat 762
Query: 63 gctaggtaagccctcggaatcttggtatccaccttgtagccctttctacttacccttttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gctaggtaagccctcggaatcttggtatccaccttgtagccctttctacttacccttttc 702
Query: 123 taattcagaacagcgaagagttataaaagtgttagtttattatccctatagggcagagat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 taattcagaacagcgaagagttataaaagtgttagtttattatccctatagggcagagat 642
Query: 183 agtacccttaaaccacatcttttccccagttagtcacgattatcctaactgactcaaaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agtacccttaaaccacatcttttccccagttagtcacgattatcctaactgactcaaaga 582
Query: 243 atatttactcacccctattagcaccaggacagatgcagtgctgctgcgtcttgggacacc 302
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 581 atatttactcacccctattagcaccaggacagatgcagtgctgccgcgtcttgggacacc 522
Query: 303 ctgtgagagactatgtgagtgcactccttgtctgtaagcactacaaggtgcctggcccaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctgtgagagactatgtgagtgcactccttgtctgtaagcactacaaggtgcctggcccaa 462
Query: 363 gagctaggaacacgccgccctttcctgcctggagtgcaggacatgaaaatggatgagtaa 422
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gagctaggaaaaggcagccctttcctgcctggagtgcaggacatgaaaatggatgagtaa 402
Query: 423 aacagtgagctggactctaaaagctccctgccttttaacaagataggaaagttgggctca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacagtgagctggactctaaaagctccctgccttttaacaagataggaaagttgggctca 342
Query: 483 gaaacttaacttatacacccaaggctactcacatggcacgtgagacagaacagtgtcaca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaaacttaacttatacacccaaggctactcacatggcacgtgagacagaacagtgtcaca 282
Query: 543 ctaaggcacccagctaagccttatcaaaacagccaaccccagactccaatttcagatagc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ctaaggcacccagctaagccttatcaaaacagccaaccccagactccaatttcagatagc 222
Query: 603 tcctctcagcttatcagc 620
| ||||||||||| ||||
Sbjct: 221 ttctctcagcttagcagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1021
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1011
Effective search space: 616710
Effective search space used: 616710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_m05.g1 MSMg01no145_m05.g1 CHROMAT_FILE:
MSMg01no145_m05.g1 PHD_FILE: MSMg01no145_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:06:57 2005
(624 letters)
>mm_chr2_157742163_157743186
Length = 1024
Score = 1145 bits (592), Expect = 0.0
Identities = 616/624 (98%)
Strand = Plus / Plus
Query: 1 ctcccttctctcccctcccatctgcctgtccagctcagttccctggcactgtcaaaactt 60
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ctcccttctctcccctcccgtctgcctgtccagctcagttccttggcactgtcaaaactt 260
Query: 61 atactaggaggcctcttcaagaaggacttgcctttctgagtttgagatcccttgaggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atactaggaggcctcttcaagaaggacttgcctttctgagtttgagatcccttgaggtac 320
Query: 121 aaacatggaactctgaggcctatggtcattgtctttggggcaccagaccctccgaatttg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaacatagaactctgaggcctatggtcattgtctttggggcaccagaccctccgaatttg 380
Query: 181 ggtcattcttgagtaagcaggctctttcctttgtgtgacagtctcctcctgccccctggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcattcttgagtaagcaggctctttcctttgtgtgacagtctcctcctgccccctggt 440
Query: 241 gccagccgcgctgaggggggcacagccctactgatcttctcatccccactctggaccaac 300
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccagctgcgctgagaggggcacagccctactgatcttctcatccccactctggaccaac 500
Query: 301 ccctgaattggggattcagggaggtgctggatgcaaaggggacacgaccagtttctgaga 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 ccctgaattggggattcagggaggtgctggatgcaaaggggacaggaccagtttctgaga 560
Query: 361 atctgatctcctcttgactgtctctgggtaaatgggtcaccccttgggacctcctctgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctgatctcctcttgactgtctctgggtaaatgggtcaccccttgggacctcctctgct 620
Query: 421 ctgtccctcaagagatggccccactgctctgcaggggcccatccaccctctcgacattgc 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 ctgtccctcaagagatggccccactgctctgcaggggcccgtccaccctctcgacattgc 680
Query: 481 caggctcaaagtcaccaagcactggctgctaaggagccccacagctgcccctctgccggg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 681 caggctcaaagtcaccaagcactggctgctaaggagccccacagctgcccctctgctggg 740
Query: 541 tccagcaccctgtcaccacaggaagggtctggagccactcacttaatcacaaaaagaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tccagcaccctgtcaccacaggaagggtctggagccactcacttaatcacaaaaagaaac 800
Query: 601 agttattaatgatagtgagacgcg 624
||||||||||||||||||||||||
Sbjct: 801 agttattaatgatagtgagacgcg 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
