Query= MSMg01no146_n09.b1 MSMg01no146_n09.b1 CHROMAT_FILE:
MSMg01no146_n09.b1 PHD_FILE: MSMg01no146_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:05 2005
(432 letters)
>mm_chr2_153593934_153594765
Length = 832
Score = 758 bits (392), Expect = 0.0
Identities = 420/438 (95%), Gaps = 16/438 (3%)
Strand = Plus / Plus
Query: 1 ccattgttcaaacgacagcggtgctgtttctcctctgtggcctttcagacttctgttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccattgttcaaacgacagcggtgctgtttctcctctgtggcctttcagacttctgttgcc 260
Query: 61 cccaaattccattttattgggaacccattttccacctggtctttcttgacagggtttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccaaattccattttattgggaacccattttccacctggtctttcttgacagggtttttt 320
Query: 121 tctactttaaacagtttttaaataaaattctgtatttcaagagtgtcctgtcttctgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctactttaaacagtttttaaataaaattctgtatttcaagagtgtcctgtcttctgaaa 380
Query: 181 tgtgtcttgccttgtgtataagcttttaattctagaggtaagatagctatgcatccatct 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtcttgccttgggtataagcttttaattctagaggtaagatagctatgcatccatct 440
Query: 241 ttggctgagcttagacagaggtt------tttttttgattcccaccgtcttaaataggac 294
||||||||||||||||||||| | | ||||||||||||||||||||||||
Sbjct: 441 ttggctgagcttagacagaggctgagaaat------gattcccaccgtcttaaataggac 494
Query: 295 taatcttttaaaatccctcacttttctcaagctaactaatctggctctccccttcctcta 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taatcttttaaaatccctcacttttctcaagctaactaatctggctctccccttcctcta 554
Query: 355 tcctcctttctccttctcccttccttccttcctccctctttttcctcttcctccctcctt 414
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 555 tcctcctttctccttctcccttccttcct----ccctctttttcctcttcctccctcctt 610
Query: 415 ttggtttttaagacagag 432
||||||||||||||||||
Sbjct: 611 ttggtttttaagacagag 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no146_n09.g1 MSMg01no146_n09.g1 CHROMAT_FILE:
MSMg01no146_n09.g1 PHD_FILE: MSMg01no146_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:05 2005
(293 letters)
>mm_chr2_153750642_153751334
Length = 693
Score = 511 bits (264), Expect = e-149
Identities = 285/300 (95%), Gaps = 14/300 (4%)
Strand = Plus / Minus
Query: 1 acagactgggaaagcctgtgctcctgtttctagggctgctatggctgacccatgcctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acagactgggaaagcctgtgctcctgtttctagggctgctatggctgacccatgcctgtc 403
Query: 61 ctgcctctttcccggcctccctgatggaggggtgactacagcaccatcctgccttgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctgcctctttcccggcctccctgatggaggggtgactacagcaccatcctgccttgcctc 343
Query: 121 tgctcatacttccttgagtaagtacagaggtctccacgaggcagagagacagagtcactg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgctcatacttccctgagtaagtacagaggtctccacgaggcagagagacagagtcactg 283
Query: 181 ggcggcaaggccatggctgtcttgctaaagccctgtgagcttgtgactttcatctccaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggcggcaaggccatggctgtcttgctaaagccctgtgagcttgtgactttcatctccaca 223
Query: 241 gagaatgtttacctcttgtttc-------tttttttagtgctcagtaggtgtctgtctgc 293
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 222 gagaatgtttacctcttgtttcagcccca-------agtgctcagtaggtgtctgtctgc 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
