Query= MSMg01no147_d01.b1 MSMg01no147_d01.b1 CHROMAT_FILE:
MSMg01no147_d01.b1 PHD_FILE: MSMg01no147_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:43 2005
(655 letters)
>mm_chr2_10339193_10340247
Length = 1055
Score = 1077 bits (557), Expect = 0.0
Identities = 603/633 (95%), Gaps = 24/633 (3%)
Strand = Plus / Plus
Query: 9 gaattcctacctgtcctcctcaacttggattctaaaccctttcttcccctacgttgcttt 68
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcctacctggggtcctcaacttggattctaaaccctttcttcccctacgttgcttt 268
Query: 69 tggccaatgttttatcactgcaactgagagactaactaggacaaaggatgaatctgcata 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tggccaatgttttatcactgcaactgagagactaactaggacaaaggatgaatctgcata 328
Query: 129 agtgagaacttgattctgtaagaccttgatggcatcttctggtgacctggggacagggaa 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agtgagaacttgattctgtaagaccttgatggcatcttctggtgacctggggacagggaa 388
Query: 189 aacggatttctctgtgtggttacttaccgcaggacatgtgaccctgagtgtgttcagtag 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aacggatttctctgtgtggttacttaccgcaggacatgtgaccctgagtgtgttcagtag 448
Query: 249 ttgtagactttgtgtagaatgaaggatgtaaaaattgattagttcgtgatctatttcctg 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ttgtagactttgtgtagaatgaaggatgtaaaaattgattagttcgtgatctatttcctg 508
Query: 309 aagaaggtaattgtccacttaaagaactaagaatgatcttgaagggacttactaagaaag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aagaaggtaattgtccacttaaagaactaagaatgatcttgaagggacttactaagaaag 568
Query: 369 gtgctttgaatctactacccctggatgaatagttggctttttgtaagatactgtaatgtc 428
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gtgttttgaatctactacccctggatgaatagttggctttttgtaagatactgtaatgtc 628
Query: 429 tgtctgtctatctatctatctatctatctatctatctatctatctatctatctatctatc 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgtctgtctatctatctatctatctatctatctatctatctatctatctatctatctatc 688
Query: 489 tatctatctatctatcaatcaaccggaatgttcttatccattgatgatccatctgtccat 548
||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 --------------------aaccggaatgttcttatccattgatgatccatctgtccat 728
Query: 549 ccatccatccatccatccatccatccatccatccatccatccatccatctatgcatccat 608
||||||||||||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct: 729 ccatccatccatccatccatccatccatccatctatgcatccatccatc----catccat 784
Query: 609 ccatccatccatccatccatccatccatccatc 641
|||||||||||||||||||||||||||||||||
Sbjct: 785 ccatccatccatccatccatccatccatccatc 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 127
Number of extensions: 52
Number of successful extensions: 52
Number of sequences better than 10.0: 1
Number of HSP's gapped: 43
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_d01.g1 MSMg01no147_d01.g1 CHROMAT_FILE:
MSMg01no147_d01.g1 PHD_FILE: MSMg01no147_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:43 2005
(162 letters)
>mm_chr2_10491650_10492211
Length = 562
Score = 298 bits (154), Expect = 1e-85
Identities = 160/162 (98%)
Strand = Plus / Minus
Query: 1 actctctggtatagccacaggtaggtagttcatatatctataaatatcttcctacccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 314 actctctggtatagccacaggtaggtagttcatatatctataaatatctccctacccatg 255
Query: 61 cacctttaagcaacgctaatgaaactcccagggtcatgaactaagaggtagctcaggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cacctttaagcaacgctaatgaaactcccagggtcatgaactaagaggtagctcaggagg 195
Query: 121 agaagggagaaaagaaggaggagggagaggaggagagaggag 162
|||||||||||||||||||||||||||||||||||| |||||
Sbjct: 194 agaagggagaaaagaaggaggagggagaggaggagaaaggag 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
