Query= MSMg01no147_g15.b1 MSMg01no147_g15.b1 CHROMAT_FILE:
MSMg01no147_g15.b1 PHD_FILE: MSMg01no147_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:00 2005
(419 letters)
>mm_chr2_109246803_109247620
Length = 818
Score = 787 bits (407), Expect = 0.0
Identities = 416/419 (99%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 1 actggttctagtttcacttttctattcgttgaaactgtttcctcaataccatttgtttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 actggttctagtttcacttttctattcgttgaaactgtttcctcaataccatttgtttaa 559
Query: 61 aagactgtattttgttaattttttttgacaattttgtttacgaactgggaatttttcaag 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aagactgtattttgttaa-tttttttgacaattttgtttacgaactgggaatttttcaag 500
Query: 121 tttttaaatcagtagagtgtggtggaaacctccacaggtcctctaggtaaacacttttct 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttttgaatcagtagagtgtggtggaaacctccacaggtcctctaggtaaacacttttct 440
Query: 181 tcgcaaatgcagcactgagcgctttagctgaggtcattcttagaaacaggatcttctctg 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tctcaaatgcagcactgagcgctttagctgaggtcattcttagaaacaggatcttctctg 380
Query: 241 gccatttatagctctgaaccagtttgcttcctactaagggtagtcccagcgatggggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gccatttatagctctgaaccagtttgcttcctactaagggtagtcccagcgatggggtta 320
Query: 301 ccccctgagccaagtgttttggtcatgcttggtcattgaccttcaaggaatgttacccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccccctgagccaagtgttttggtcatgcttggtcattgaccttcaaggaatgttacccta 260
Query: 361 ttctctttggctctccttgagcatacggggactgttgctgtatccattatccatggcgc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttctctttggctctccttgagcatacggggactgttgctgtatccattatccatggcgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 818
Length adjustment: 9
Effective length of query: 410
Effective length of database: 809
Effective search space: 331690
Effective search space used: 331690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_g15.g1 MSMg01no147_g15.g1 CHROMAT_FILE:
MSMg01no147_g15.g1 PHD_FILE: MSMg01no147_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:00 2005
(486 letters)
>mm_chr2_109121612_109122497
Length = 886
Score = 878 bits (454), Expect = 0.0
Identities = 477/486 (98%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 1 agtgtatgaaaagaactatttcagtcagcaggaatgatttgccttgagaggtattctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agtgtatgaaaagaactatttcagtcagcaggaatgatttgccttgagaggtattctcat 263
Query: 61 tgaaccagtatttacagatatttaagattttttttttattttaaagagcatcttgtttca 120
||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 264 tgaaccagtatttacagatatttaaga---tttttttattttaaagagcattttgtccca 320
Query: 121 ctgtagttatacttttcaatagacactataaattgactatgctgttaatgctatgaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtagttatacttttcaatagacactataaattgactatgctgttaatgctatgaaagg 380
Query: 181 caatagaaaaacaattggcccaccaccaatactgataatcttccctcgtgttagtaaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatagaaaaacaattggcccaccaccaatactgataatcttccctcgtgttagtaaggc 440
Query: 241 agtcaaatcagtgactgacagaaaggtttaagccagatagaaactgtaaatgaggcaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcaaatcagtgactgacagaaaggtttaagccagatagaaactgtaaatgaggcaagg 500
Query: 301 tccctgttctaaaccgtgtcgaatcagaattttctacctgagttgggaataattcatagc 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 tccctgttctaaaccatgtcgaatcagaattttctacctgagttgggaataattcgtagc 560
Query: 361 tatgccattgtgcttctatacacctgtttggaagcattttctttttctcagtcatgagat 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtcattgtgcttctatacacctgtttggaagcattttctttttctcagtcatgagat 620
Query: 421 ttggatttgtagctgggtccgctttctgtcatattagtaataacatttggaaacattact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttggatttgtagctgggtccgctttctgtcatattagtaataacatttggaaacattact 680
Query: 481 aagttc 486
||||||
Sbjct: 681 aagttc 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
