Query= MSMg01no147_l21.b1 MSMg01no147_l21.b1 CHROMAT_FILE:
MSMg01no147_l21.b1 PHD_FILE: MSMg01no147_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:24 2005
(574 letters)
>mm_chr2_167928786_167929759
Length = 974
Score = 874 bits (452), Expect = 0.0
Identities = 461/464 (99%)
Strand = Plus / Minus
Query: 111 tgcctcgcctgctcaagttcctgagttcaatccccaggaggctaggaagaaaaaaagcca 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 tgcctcgcctgctcaagttcctgagttcaatccccaggaggctaggaagaaaaaaagcca 915
Query: 171 ggtgggtggctcgagttttatagttcccagcactagagaagcagaggcaggaggattggg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ggtgggtggctcgagttttatagttcccagcactagagaagcagaggcaggaggattggg 855
Query: 231 agttcaaagtcatcttagggtattgagtgagtctgaggccagtctaggtttcaggggacc 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 agttcaaagtcatcttagggtattgagtgagtctgaggccagtctaggtttcaggggacc 795
Query: 291 ctgtcctaaaactaaacaaacctacagttcccgcactcgtgatagaatcagcccgaccta 350
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 794 ctgtcctaaaactaaacaaacctacagttcccgcactcgtgatagaatcagcctgaccta 735
Query: 351 cactgtatgctccagaccaggcagtgttacccagaaccctctgcttcaggggttcagggc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cactgtatgctccagaccaggcagtgttacccagaaccctctgcttcaggggttcagggc 675
Query: 411 ccccatttgtcagccctatccgccctgtcccactccagatccaggacaatagaaccagca 470
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 674 ccccatttgtcagccctatccgccctgtcccactccagacccaggacaatagaaccagca 615
Query: 471 aggatatttagcactctatagtcccacacgctgctgcagagggttatttgtctcacacat 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aggatatttagcactctatagtcccacacgctgctgcagagggttatttgtctcacacat 555
Query: 531 gagatttgtgaccataagcgaatgtcacgtgcatgggtgcccac 574
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 554 gagatttgtgaccataagtgaatgtcacgtgcatgggtgcccac 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_l21.g1 MSMg01no147_l21.g1 CHROMAT_FILE:
MSMg01no147_l21.g1 PHD_FILE: MSMg01no147_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:10:25 2005
(563 letters)
>mm_chr2_167836020_167836988
Length = 969
Score = 1035 bits (535), Expect = 0.0
Identities = 558/573 (97%), Gaps = 14/573 (2%)
Strand = Plus / Plus
Query: 1 agtctggccacagtcacccctgcatcactgcccatcagaaccctgcaatttcacctcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtctggccacagtcacccctgcatcactgcccatcagaaccctgcaatttcacctcatt 260
Query: 61 tcgaggtaaagtggctaaatttagcgtggtgggtttgtgggtctgggcggcttttatgac 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgaggtaaagtggctaaatttagcatggtgggtttgtgggtctgggcggcttttatgac 320
Query: 121 tgagtccctcacttatggctgtattttttttctctcctaaatgctggccagggcttgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagtccctcacttatggctgtattttttttctctcctaaatgctggccagggcttgaat 380
Query: 181 tgcctctgggagtttctgaaatagctcccttggtatagcctgagaggaactggtaggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcctctgggagtttctgaaatagctcccttggtatagcctgagaggaactggtaggtca 440
Query: 241 aacccggatgggaatgagcctaaacaggagaggtggacggcccagcagaacgccctgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacccggatgggaatgagcctaaacaggagaggtggacggcccagcagaacgccctgaaa 500
Query: 301 ccagaccgtctgacccagaggggcctgagggagccaacctctccccc----taccgcatg 356
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 ccagaccgtctgacccagaggggcctgagggagccaacctctc----attttaccgcatg 556
Query: 357 ctcacgtgacttgcctggaagagcaaaaggaactgaactcctgagctgagtgcagcagcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctcacgtgacttgcctggaagagcaaaaggaactgaactcctgagctgagtgcagcagcc 616
Query: 417 actgctccatcagaaaccttcacgggcgggcgtgggggtgggg------ctgccccaggg 470
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 617 actgctccatcagaaaccttcacgggcgggcgtgggggtgggggtggggctgccccaggg 676
Query: 471 ctttttcactggctgtccttctaacagcttcctcccgtgccccggcttttttgcttcctc 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctttttcactggctgtccttctaacagcttcctcccgtgccccggcttttttgcttcctc 736
Query: 531 taagccttcatctctcatggctgaggtcactcc 563
|||||||||||||||||||||||||||||||||
Sbjct: 737 taagccttcatctctcatggctgaggtcactcc 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 969
Length adjustment: 10
Effective length of query: 553
Effective length of database: 959
Effective search space: 530327
Effective search space used: 530327
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
