Query= MSMg01no148_i01.b1 MSMg01no148_i01.b1 CHROMAT_FILE:
MSMg01no148_i01.b1 PHD_FILE: MSMg01no148_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:25 2005
(371 letters)
>mm_chr2_69242523_69243293
Length = 771
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%), Gaps = 2/368 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaggaagtccc-tgtatttaaaattcattgtgtgatatgtggcttttcttttt 63
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaattcacaggaag-cccatgtatttaaaattcattgtgtgatatgtggcttttcttttt 603
Query: 64 ccctttcttcctttttttttttttttctcttagagttcaaggatggggaatttagctcag 123
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 602 ccctttcttcctttttttttttttccctcttagagttcaaggatggggaatttagctcag 543
Query: 124 attattatacatgcaagaatttggatatcatgtttttttctttgtaaagagaacagtaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 attattatacatgcaagaatttggatatcatgtttttttctttgtaaagagaacagtaaa 483
Query: 184 tatcttctgtgtaatggccataatgaattcataggaaatccatggactgtactccgggta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tatcttctgtgtaatggccataatgaattcataggaaatccatggactgtactccgggta 423
Query: 244 gagcgtggctgtttgaaaaactgaatgggaatccttctgatgatggaagcaggagctgga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gagcgtggctgtttgaaaaactgaatgggaatccttctgatgatggaagcaggagctgga 363
Query: 304 gccctaaagtgttctagaactggagctagttggcaaagcaattagaaggcagtgacctcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccctaaagtgttctagaactggagctagttggcaaagcaattagaaggcagtgacctcc 303
Query: 364 ccttcttc 371
||||||||
Sbjct: 302 ccttcttc 295
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_i01.g1 MSMg01no148_i01.g1 CHROMAT_FILE:
MSMg01no148_i01.g1 PHD_FILE: MSMg01no148_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:25 2005
(514 letters)
>mm_chr2_69128345_69129258
Length = 914
Score = 886 bits (458), Expect = 0.0
Identities = 485/494 (98%)
Strand = Plus / Plus
Query: 1 atgaccatagccccatcagaggatatactagagtctattttcttcttctcaagtgtttaa 60
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 201 atgaccatagccccatcagaggttatactggagtctattttcttcttctcaagtgtttaa 260
Query: 61 taaagataataaaataaaatagaaatgccttaattctcagctgtttacatggaagctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagataataaaataaaatagaaatgccttaattctcagctgtttacatggaagctctg 320
Query: 121 caggcatcatttgatttgagactgggacagaaaaggtaacattagaaaaggacaaagggg 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 caggcatcatttgatttgagactgggacagaaaagataacattagaaaaggacaaagggg 380
Query: 181 ctcaaaaagatggctcagtggttaagagcactgacggctcttctagaggtcctgagttta 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 ctcaaaaagatggctcagtggttaagagcactgactgctcttctagaggtcctgagttta 440
Query: 241 attcccagcagccacatggtggctcacaaccatctgtaatgggatctgatgcctacttct 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 attcccagcagccacatggtggctcacaaccatccgtaatgggatctgatgcctacttct 500
Query: 301 ggtgtgtctgaagacagtgatggtgcagtcatatacataaaacacacaaataaattttaa 360
||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct: 501 ggtgtatctgaagacagtgatggtgcagtcatatacataaaataaataaataaattttaa 560
Query: 361 aaagaaaagatcaaagggctggagagatggctcagtcattacttgctcttcagaggaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagaaaagatcaaagggctggagagatggctcagtcattacttgctcttcagaggaccc 620
Query: 421 aaattcggttcccagctcccacaatgggaggctcatggagtctaacatttctgacctgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaattcggttcccagctcccacaatgggaggctcatggagtctaacatttctgacctgca 680
Query: 481 ctcacatgcacaga 494
||||||||||||||
Sbjct: 681 ctcacatgcacaga 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
