Query= MSMg01no150_f15.b1 MSMg01no150_f15.b1 CHROMAT_FILE:
MSMg01no150_f15.b1 PHD_FILE: MSMg01no150_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:53 2005
(323 letters)
>mm_chr2_90686801_90687523
Length = 723
Score = 578 bits (299), Expect = e-169
Identities = 317/323 (98%)
Strand = Plus / Plus
Query: 1 atctgttgttcattagacatgataactctaacggaaaacaaccatcaaactttacgtcgt 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctgttgttcattagacatgacaactctaacggaaaacaaccatcaaactttacgtcgt 260
Query: 61 caaagcctgaaagaggataggagtataactcagttcttccagttgttagtccgctgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaagcctgaaagaggataggagtataactcagttcttccagttgttagtccgctgacct 320
Query: 121 tgcctttgccgtcagggtcaccccaccaccaccccatcattaccattccctccctactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcctttgccgtcagggtcaccccaccaccaccccatcattaccattccctccctactcc 380
Query: 181 ttccggacacttccggcttgcgcaggcgcaagagaaatcgccttccctagaggcgcgagg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 ttccggacacttccggcttgcgcaggcgcaagagaaatcgcctttcctagaggcgcgagg 440
Query: 241 agcccacgcccagacgtatgcgcgaccctcccacaagccccgccccaggcggtccctcgc 300
|||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 441 agcccacgcccagacgcatgcgcgtccctcccacaagccccgccccaggcggcccctcgc 500
Query: 301 gagcgtctgccgtttctttgggc 323
||||| |||||||||||||||||
Sbjct: 501 gagcgcctgccgtttctttgggc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_f15.g1 MSMg01no150_f15.g1 CHROMAT_FILE:
MSMg01no150_f15.g1 PHD_FILE: MSMg01no150_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:53 2005
(400 letters)
>mm_chr2_90802944_90803743
Length = 800
Score = 611 bits (316), Expect = e-179
Identities = 337/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Minus
Query: 53 aaaaaaaatttgtagtggctagagttggctcagtggttaagagtactggctgctcttcca 112
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 aaaaaaaa-ttgtagtggctagagttggctcagtggttaagagtactggctgctcttcca 738
Query: 113 aatatcctgagttcaattcaaagcaaccacatggtggctcacaaccatctgtaatgagat 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aatatcctgagttcaattcaaagcaaccacatggtggctcacaaccatctgtaatgagat 678
Query: 173 ctggtaccttcttctggcatgcaggtgtacatgctgatagagcactcatacataaaataa 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctggtaccttcttctggcatgcaggtgtacatgctgatagagcactcatacataaaataa 618
Query: 233 ataaaattttaaaaagagagaggagagagcaaaggcagacttttattccacggagcctac 292
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 617 ataaaattttaaaaagagagaggagagagcaaaggtagacttttattccacggagcctac 558
Query: 293 ccactttcactaagttcacctacagtgtcttcaacatggggaaatgcagacccgcaatac 352
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 557 ccactttcactaagttcacctacagtgtcttcaacatggggaaatgcagatttggaatac 498
Query: 353 actgaagttcctctgttcctggatttggtttggttttttttttt 396
||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 497 actgaagttcctctgttgctggatttggtttggttttttttttt 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
