Query= MSMg01no151_d01.b1 MSMg01no151_d01.b1 CHROMAT_FILE:
MSMg01no151_d01.b1 PHD_FILE: MSMg01no151_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:56 2005
(656 letters)
>mm_chr2_82104270_82105325
Length = 1056
Score = 1239 bits (641), Expect = 0.0
Identities = 650/653 (99%), Gaps = 2/653 (0%)
Strand = Plus / Minus
Query: 5 gaattcactct-cttcttattaaagatgttataaccattgaaaattcagtccagaaacat 63
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaattcactctcctt-ttattaaagatgttataaccattgaaaattcagtccagaaacat 798
Query: 64 gaagagaatatgtttagaaggtgaggacatttgatgtctgtcaatcgcacttagagtgat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gaagagaatatgtttagaaggtgaggacatttgatgtctgtcaatcgcacttagagtgat 738
Query: 124 gtaattaactcggatacagaagtagagtttcacaagaatgaacagaagacgtaagacaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gtaattaactcggatacagaagtagagtttcacaagaatgaacagaagacgtaagacaca 678
Query: 184 tagtgcgtttagacccggatagaaatggtagctgttcaaataacccaatgggccagggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tagtgcgtttagacccggatagaaatggtagctgttcaaataacccaatgggccagggaa 618
Query: 244 gaacctaagaaaggaacttaatctgcggaatctgaaaagcaaacactgaggaaaagcagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaacctaagaaaggaacttaatctgcggaatctgaaaagcaaacactgaggaaaagcagg 558
Query: 304 ggagaatgtaagatgcagtattgttctcctggaaatgtggactgaataaggtgaatctaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggagaatgtaagatgcagtattgttctcctggaaatgtggactgaataaggtgaatctaa 498
Query: 364 aattatttaatcacaaggttttccaaatagacgctaactcattatgttaagtcaccaaag 423
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aattatttaatcagaaggttttccaaatagacgctaactcattatgttaagtcaccaaag 438
Query: 424 cataagaaaatgacttgtattatatatgagcatatggatttttctcctaattcactatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cataagaaaatgacttgtattatatatgagcatatggatttttctcctaattcactatat 378
Query: 484 cttacatttttagcaaaatgtgaattcacatacggatagttacaacttaataataattat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cttacatttttagcaaaatgtgaattcacatacggatagttacaacttaataataattat 318
Query: 544 tattggaaaggatacaaagttacattcctagaagcctcttaacataaggttcatcaggaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tattggaaaggatacaaagttacattcctagaagcctcttaacataaggttcatcaggaa 258
Query: 604 aactcagtacataatgcatgaatactttctaggaacttatctttcctatttat 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aactcagtacataatgcatgaatactttctaggaacttatctttcctatttat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no151_d01.g1 MSMg01no151_d01.g1 CHROMAT_FILE:
MSMg01no151_d01.g1 PHD_FILE: MSMg01no151_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:56 2005
(629 letters)
>mm_chr2_81990904_81991932
Length = 1029
Score = 1195 bits (618), Expect = 0.0
Identities = 626/629 (99%)
Strand = Plus / Plus
Query: 1 tactgcaatgcctaaactcaactgaactacattcattaaactgccctccactcctgactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tactgcaatgcctaaactcaactgaactacattcattaaactgccctccactcctgactc 260
Query: 61 tcttggcactgcacttaagtagactcactttcctgtctcttctctgagagttgggctttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttggcactgcacttaagtagactcactttcctgtctcttctctgagagttgggctttt 320
Query: 121 cctgtctctgatttgttctgtgagatctttctctgatttatccctttgcccatcagatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtctctgatttgttctgtgagatctttctctgatttatccctttgcccatcagatgt 380
Query: 181 cactttcaaatatggctgcttccttctacaaaataaatttactttcactgtttaggatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactttcaaatatggctgcttccttctacaaaataaatttactttcactgtttaggatta 440
Query: 241 aaaatatgtactaagggtgtgtctgaaaccagtaacagggattaaatgtgtgacacccca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 aaaatatgtactaagggtgtgtctgaaaccagtaacagggattaaatgtgtgacacccaa 500
Query: 301 tccaagagaagccatgttgctacattaaaagtcctctacaactatttattctgaaacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccaagagaagccatgttgctacattaaaagtcctctacaactatttattctgaaacaac 560
Query: 361 aaaataattgtaataataaaaatacatggaaaccttgaaaaaacacaatgctcagatctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaataattgtaataataaaaatacatggaaaccttgaaaaaacacaatgctcagatctg 620
Query: 421 tgtatgcaaaaattttgaagcaattcttttaagtaaattattatgaataaaggaaaattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgtatgcaaaaattttgaagcaattcttttaagtaaattattatgaataaaggaaaattt 680
Query: 481 gagcctattataactgttctacagtaatagcatatagagattaattaccaaaagaaataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagcctattataactgttctacagtaatagcatatagagattaattaccaaaagaaataa 740
Query: 541 caaaaacatatttattaaaattcaataaaaactcacattgtcaaaacactatcattttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caaaaacatatttattaaaattcaataaaaactcacattgtcaaaacactatcattttag 800
Query: 601 tttgtatganaaataataatacttagcaa 629
||||||||| |||||||||||||||||||
Sbjct: 801 tttgtatgaaaaataataatacttagcaa 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
