Query= MSMg01no151_k10.b1 MSMg01no151_k10.b1 CHROMAT_FILE:
MSMg01no151_k10.b1 PHD_FILE: MSMg01no151_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:31 2005
(243 letters)
>mm_chr2_110905326_110905968
Length = 643
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 ttttctgtatgattttcagtgtgaacacggtaaaatttaaggattattgacactgaatga 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 442 ttttctgtatgattttcagtgtgaacacagtaaaatttaaggattattgacactgaatga 383
Query: 61 actatttatttatagatttatcatattttgacacgaggaaattttcataaagaagtattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 actatttatttatagatttatcatattttgacacgaggaaattttcataaagaagtattc 323
Query: 121 atttgagtgaaatgtaaatgcatgctcatatcattattattaaagggtacatctctctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atttgagtgaaatgtaaatgcatgctcatatcattattattaaagggtacatctctctat 263
Query: 181 atgcgggcgcatagctttcatgatattttcatctttagttaccaagaaatagggaagacc 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 262 atgcgggcgcatagctttcatgatgttttcatctttagttaccaagaaatagggaagacc 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no151_k10.g1 MSMg01no151_k10.g1 CHROMAT_FILE:
MSMg01no151_k10.g1 PHD_FILE: MSMg01no151_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:31 2005
(347 letters)
>mm_chr2_110804383_110805130
Length = 748
Score = 615 bits (318), Expect = e-180
Identities = 341/350 (97%), Gaps = 5/350 (1%)
Strand = Plus / Plus
Query: 1 ctcataaaggcatgaaggacacatccctctaaagaaac-ctcctaacagaagaatgtgat 59
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ctcataaaggcatgaaggacacatccctctaaagaaagtctcctaacagaagaatgtgat 260
Query: 60 ggattaaataactataaagaatagaaagtacagtagagtttgagaaatatttttaataga 119
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 261 ggattaaataattataaagaatagaaagtacagtagagtttgagaaacatttt-aataga 319
Query: 120 aacataaataaaattaatatacatgtaaaaggtgaatggacagggaaccacttagtaaga 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 320 aacataaataaaattaatatacatgtaaaagatgaatggacagggaaccacttagtaaga 379
Query: 180 ggatatgtgtagagtatagtgtatctctggtaatgaagggacatggtataataaagcctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggatatgtgtagagtatagtgtatctctggtaatgaagggacatggtataataaagcctt 439
Query: 240 ttcctctcaggattgctgggattgctcagagtgaaatgcagtgataggaacaaagatagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcctctcaggattgctgggattgctcagagtgaaatgcagtgataggaacaaagatagg 499
Query: 300 gagatgcaagcattctacagaaagataaaacatattgtag---gtctgtg 346
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 gagatgcaagcattctacagaaagataaaacatattgtagaaggtctgtg 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|