Query= MSMg01no152_m13.b1 MSMg01no152_m13.b1 CHROMAT_FILE:
MSMg01no152_m13.b1 PHD_FILE: MSMg01no152_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:59 2005
(204 letters)
>mm_chr2_108710167_108710770
Length = 604
Score = 395 bits (204), Expect = e-114
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 1 gagctttcattcactcacactgctctttattttcgggcacaacttcctggaggcactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagctttcattcactcacactgctctttattttcgggcacaacttcctggaggcactgtg 260
Query: 61 aagaaaacacaactaagtagctcacattgtttaaatactgaacaacacacattttcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaaacacaactaagtagctcacattgtttaaatactgaacaacacacattttcaaga 320
Query: 121 aagcaaaagtaatatgccataagccatcaaaggcttgctcccaaaatttctcaacatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaaaagtaatatgccataagccatcaaaggcttgctcccaaaatttctcaacatata 380
Query: 181 aacatataaataaacaggagaact 204
||||||||||||||||||||||||
Sbjct: 381 aacatataaataaacaggagaact 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no152_m13.g1 MSMg01no152_m13.g1 CHROMAT_FILE:
MSMg01no152_m13.g1 PHD_FILE: MSMg01no152_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:16:59 2005
(301 letters)
>mm_chr2_108824577_108825277
Length = 701
Score = 516 bits (267), Expect = e-151
Identities = 292/301 (97%), Gaps = 3/301 (0%)
Strand = Plus / Minus
Query: 1 gaagttaacgataccagaaggtttaaattcttcacatgaacgctcaactctttataatag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 455 gaagttaacgataccagaaggtttaaattcttcacatgaatgctcaactctctataatag 396
Query: 61 aggtcatatctacctgtggtttttaaaagtctcttaacatctaccatctttaagatcttg 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aggccatatatacctgtggtttttaaaagtctcttaacatctaccatctttaagatcttg 336
Query: 121 gaagtaagaacttcatttctactgacatgtctcctgatgacatctttggattatagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gaagtaagaacttcatttctactgacatgtctcctgatgacatctttggattatagaaaa 276
Query: 181 cagctgtaaaattgctttcacccatactggtgtgctaatcattatcatattttgcacatt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 275 cagctgtaaaattgctttcacccatactggtgtgctaatcattatcatattttgtacatt 216
Query: 241 cttgttaacagaagttttttttgttggcttgttttcttttgtttgtttgtttgttttgga 300
||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||
Sbjct: 215 cttgttaacagaagttttttttgttggtttgtttt-tttt--ttgtttgtttgttttgga 159
Query: 301 g 301
|
Sbjct: 158 g 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
