Query= MSMg01no153_c10.b1 MSMg01no153_c10.b1 CHROMAT_FILE:
MSMg01no153_c10.b1 PHD_FILE: MSMg01no153_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:27 2005
(675 letters)
>mm_chr2_45478650_45479725
Length = 1076
Score = 1263 bits (653), Expect = 0.0
Identities = 667/675 (98%), Gaps = 7/675 (1%)
Strand = Plus / Plus
Query: 5 gaattctttcacagtctcc----aaaaaatggataggaaaagatgaagagtgacctgaca 60
|||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcacag---cctggaaaaaaatggataggaaaagatgaagagtgacctgaca 261
Query: 61 tcatagaacactcaatgtagcctacatatttcctcagtgtacatacagaaactaaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcatagaacactcaatgtagcctacatatttcctcagtgtacatacagaaactaaatcat 321
Query: 121 ctacaccagagaaacaggcatccgtagtgacttcaaaagtcctttttcttttgtttcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctacaccagagaaacaggcatccgtagtgacttcaaaagtcctttttcttttgtttcctt 381
Query: 181 cactgttgaagactcctggaattatcctcagctatgagagttctactagggatcattaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cactgttgaagactcctggaattatcctcagctatgagagttctactagggatcattaac 441
Query: 241 taagtaaagactcactacatactttatctgaagtaagacatcaccacctggtatgaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taagtaaagactcactacatactttatctgaagtaagacatcaccacctggtatgaaatt 501
Query: 301 aaatgaagcatactcagtatttggaatcccataggatatttcattcagctatttgattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aaatgaagcatactcagtatttggaatcccataggatatttcattcagctatttgattgt 561
Query: 361 ccaagcacaaagtatttgcttatagaatgtgaggaagtcaagagacatccataataaaag 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccaagcacaaagtagttgcttatagaatgtgaggaagtcaagagacatccataataaaag 621
Query: 421 gaaagtagataattgttctctgagcaaagatctgtaggctcctttggtataacgggcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaaagtagataattgttctctgagcaaagatctgtaggctcctttggtataacgggcatt 681
Query: 481 cccgaaatatatagaatacattaagacttatgaaatatagtccatctatgtgcccttgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cccgaaatatatagaatacattaagacttatgaaatatagtccatctatgtgcccttgta 741
Query: 541 gtattcgactaccaaatttgggcatctgaagattccaacatagtttaatttatgtgctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gtattcgactaccaaatttgggcatctgaagattccaacatagtttaatttatgtgctgg 801
Query: 601 tagcttggtaaagttgtttccacagttgggtccctatccattatcatagagtttcgggga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tagcttggtaaagttgtttccacagttgggtccctatccattatcatagagtttcgggga 861
Query: 661 cttttcatgtactgt 675
|||||||||||||||
Sbjct: 862 cttttcatgtactgt 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_c10.g1 MSMg01no153_c10.g1 CHROMAT_FILE:
MSMg01no153_c10.g1 PHD_FILE: MSMg01no153_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:27 2005
(614 letters)
>mm_chr2_45557275_45558288
Length = 1014
Score = 1164 bits (602), Expect = 0.0
Identities = 611/614 (99%)
Strand = Plus / Minus
Query: 1 cagctagccttggaacataagaaggctggaggaaagagtcagaattagaaaacactagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 814 cagctagccttggaacataagaaggctggaggaaagagtcagaattagaaaacactatac 755
Query: 61 tttacctaaagaaacagaggaagaacttcaggacccaacaaagaacatgaaagaaaagga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 754 tttacctaaagaaacagaggaagaacttcaggacccagcaaagaacatgaaagaaaagga 695
Query: 121 aatagcagaaaacaaatcaggataccagagatgtaagccaaacaaaacatcagttggcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 aatagcagaaaacaaatcaggataccagagatgtaagccaaacaaaacatcagttggcaa 635
Query: 181 tttcctggcagggagagaggaaacggaaacctctctgaaaggtaaccatatggaaatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tttcctggcagggagagaggaaacggaaacctctctgaaaggtaaccatatggaaatagc 575
Query: 241 acctcaaataccatccacacacttcacggccttaaacccaactgtgttttcatgaacggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 acctcaaataccatccacacacttcacggccttaaacccaactgtgttttcatgaacggt 515
Query: 301 gatggataggcccgtggcagagagaaatcttcctttgtcatactgtctgccaaagaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 gatggataggcccgtggcagagagaaatcttcctttgtcatactgtctgccaaagaagat 455
Query: 361 cagccagaataaaggagaacctattgctaaaactaagctatgtgggtgctggagatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagccagaataaaggagaacctattgctaaaactaagctatgtgggtgctggagatcaag 395
Query: 421 gaatacacacagttctgggaacctcaaaccagctgtctcttaagttcgggaagaagcaaa 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 394 gaatacacacagttctgggaacctcaaatcagctgtctcttaagttcgggaagaagcaaa 335
Query: 481 gtgggagttgtggagaccaggaagatagggcactaacaagttaaaatctgtgtaggggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtgggagttgtggagaccaggaagatagggcactaacaagttaaaatctgtgtaggggca 275
Query: 541 ggagggtagcaggctacaaaggtgcaaaaggagaaataaccccattgtcttagccaaggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggagggtagcaggctacaaaggtgcaaaaggagaaataaccccattgtcttagccaaggt 215
Query: 601 ttctattgctgtga 614
||||||||||||||
Sbjct: 214 ttctattgctgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
