Query= MSMg01no153_c15.b1 MSMg01no153_c15.b1 CHROMAT_FILE:
MSMg01no153_c15.b1 PHD_FILE: MSMg01no153_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:28 2005
(576 letters)
>mm_chr2_126401617_126402592
Length = 976
Score = 1098 bits (568), Expect = 0.0
Identities = 574/576 (99%)
Strand = Plus / Plus
Query: 1 acagctgccttgcaagtgttcagtaggcacacgtcactggccccaccctgagcagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagctgccttgcaagtgttcagtaggcacacgtcactggccccaccctgagcagagcag 260
Query: 61 atattccttccatcacggacaaccctacggagccacgctgctgtaggctggaatgttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattccttccatcacggacaaccctacggagccacgctgctgtaggctggaatgttagt 320
Query: 121 gtcaggccagtgtgaactagcctagctgtggagatggaggacaaccacaagcaagctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaggccagtgtgaactagcctagctgtggagatggaggacaaccacaagcaagctggc 380
Query: 181 agcgctgctactgttgacctcagagaggacttttaggggaatttgttttcgaccaaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcgctgctactgttgacctcagagaggacttttaggggaatttgttttcgaccaaactt 440
Query: 241 ctccttacacatgtacataagcacacctagctctttcctttctcatccgttggtcctcag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ctccttacacatgtacataagcacacctagctctttcctttctcatccattggtcctcag 500
Query: 301 gtccttgtcagcttttctacgtgaagcaaactcctttaaaaaggaaaagaggggcgatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtccttgtcagcttttctacgtgaagcaaactcctttaaaaaggaaaagaggggcgatgg 560
Query: 361 gggagaatttttagaaagtgcagaggtatcctagcagttaatgtggaaagaaacattaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggagaatttttagaaagtgcagaggtatcctagcagttaatgtggaaagaaacattaat 620
Query: 421 aaaaactacaggatttttgatgttcctataaattaagtcagcatacatttgttgtccata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaactacaggatttttgatgttcctataaattaagtcagcatacatttgttgtccata 680
Query: 481 aaagccatttggtttttggtggtgttggcttggatttttgttttgtttgtcttgcgtttc 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 681 aaagccatttggtttttggtggtgttggcttggatttttgttttgtttgtcttgtgtttc 740
Query: 541 ctgacagggtctctctgtgtagccctagccatccta 576
||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgacagggtctctctgtgtagccctagccatccta 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space: 546756
Effective search space used: 546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_c15.g1 MSMg01no153_c15.g1 CHROMAT_FILE:
MSMg01no153_c15.g1 PHD_FILE: MSMg01no153_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:17:28 2005
(509 letters)
>mm_chr2_126501677_126502587
Length = 911
Score = 710 bits (367), Expect = 0.0
Identities = 382/387 (98%), Gaps = 2/387 (0%)
Strand = Plus / Minus
Query: 125 gtttactttgctatgtcttacactggctacaaactttcactatataaataagaaaggcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 gtttactttgctatgtcttacactggctacaaactttcactatataaataagaaaggcag 852
Query: 185 ccgggcgtggtggcctttaatcccagcactcgggaggcagaggcaggcagatttctgagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ccgggcgtggtggcctttaatcccagcactcgggaggcagaggcaggcagatttctgagt 792
Query: 245 tcgaggccagtctggtctacaaagtgagttccaggacagccaggggctatacagagaaac 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tcgaggccagcctggtctacaaagtgagttccaggacagccaggggctatacagagaaac 732
Query: 305 ccggtctcgaaaaaccaaaaaataagggcaagtgtccttatc-gaggacagacacacaca 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 731 ccggtctcgaaaaaccaaaaaataagggcaagtgtccttatctgaggacagacacacaca 672
Query: 364 aacacaaatgaattctgtaaacaaattggatctcatttaagcca-tttgctcctaggtta 422
|||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 671 aacacaaatgaagtctgtaaacaatttggatctcatttaagccattttgctcctaggtta 612
Query: 423 ttctcggttgtctccgatattctcattcctagatacctgacgccaaaagttccacgggta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttctcggttgtctccgatattctcattcctagatacctgacgccaaaagttccacgggta 552
Query: 483 gtggacttttcggtgaaatatatcaaa 509
|||||||||||||||||||||||||||
Sbjct: 551 gtggacttttcggtgaaatatatcaaa 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 911
Length adjustment: 10
Effective length of query: 499
Effective length of database: 901
Effective search space: 449599
Effective search space used: 449599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
