TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGATGCATACTGGCATCAATGTGCCATCAAGCTTTTGCCATAAAA
ACCTCTCTAACACAATATTATCAAAGCAGGAAAAGCAAATGCGATGTTCA
ACCTAAACTGTAGTGACATCATTTTACTGCTATTATAATTATTATTATTC
TTTAGTATAGACTTTATCCCCCTCCTTGTCCACCCTCTGACAATTACACA
TACCATACCTCCTCGCCCCACCCCCATCTCCAAGAGGATGTCCCCAGCCT
TCTCCCACCCCACCAGACCTCCCCACTCCTTGGGCCCCCTAGTCTCTAGA
GAGTTAGGTAAATCTCTGTCTGAGTCTAGACCTGGTAATCCTTCGCTGTA
TATGTTGGGGGGCTCATATCAGCTAGTGTATGCTGCTTGGTTGGTGGCTC
AGTGTCTGAGAGATCCCAGGATTCCAGGTTAGTTGAGACTGCCGATCCTC
ATATAGGGTCACCATCCTCCTCAGCTTCTTCCAGCTTTTCCCTAATTCAA
CCACAGGGGTCACCAGCTTATGTCCATTGGTTGAGTATAAATATCTGCAT
CTGACTCTTTCAGCTGTTTCTTGGGCCTTTAAGAAGACAGAGTTGACTGT
GGGATGGCAACCTCAACTTCGGGATGTAGGAGGTGGGGGCCCCCTCTAGT
ATGTAGC

ATGCAGNTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGAAGGACATGAAGCAGGAGCATATGC
AGAGGCCATGGAGGGATGTTACTTACTGGCTTGCTTTCCCTGGCTTGCTC
GCTTGCTTTCTTATAGAACCCAGGACTACCAGTCCAGGGATGGCACCACC
CACAAGGGGCCCTCCCATCCTTGATCACTAATTGAGAAAATGCCTTACAG
CTGGATCTCCTGGAGACATTTTCTCAAGAGAAGCTCCGTTCTCTGTGCTA
ACTCCAGCTTGTATCAAGTTGACACAGAAAACCAGCCAGTACAAACACCC
TTTACAGTAGCCATAAATAATATAAAGTAACTTCATGTAACCCTAACCAA
GCAAGTGAAAGACCTATATAACAAGATATTCAGGTATCTGAAGAAAGAAA
CTGAGGAAGATAACAGAAGATGGAAAGAGCTTCCATGCTCAAGGATTGGT
AGTATTAACATAATAAAAACAGAGGACAAATACCCAAAATGTATAAAGGG
CCCAAGAAGTTAGATACTAACAAACCAAATAATGCAAATAAAAATGTGTT
ACATAGCTAAACAGAGAATTCTTAATAGATGAACTTCTAATGGCAGAGAA
GCACGTAAGTATTTAACATCCTTAGTCATCAGGGAAATGCAAATCAACAT
GATTCTG

Query= MSMg01no154_d10.b1 MSMg01no154_d10.b1 CHROMAT_FILE:
MSMg01no154_d10.b1 PHD_FILE: MSMg01no154_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:47 2005
         (657 letters)



>mm_chr2_100842294_100843350
          Length = 1057

 Score = 1243 bits (643), Expect = 0.0
 Identities = 650/653 (99%), Gaps = 2/653 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgatgcatactggcatcaatgtgccatcaagcttttgccataaaaacctctc 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgatgaatactggcatcaatgtgccatcaagcttttgccataaaaacctctc 264

                                                                       
Query: 65  taacacaatattatcaaagcaggaaaagcaaatgcgatgttcaacctaaactgtagtgac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taacacaatattatcaaagcaggaaaagcaaatgcgatgttcaacctaaactgtagtgac 324

                                                                       
Query: 125 atcattttactgctattataattattattattctttagtatagactttatccccctcctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcattttactgctattataattattattattctttagtatagactttatccccctcctt 384

                                                                       
Query: 185 gtccaccctctgacaattacacataccatacctcctcgccccacccccatctccaagagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtccaccctctgacaattacacataccatacctcctcgccccacccccatctccaagagg 444

                                                                       
Query: 245 atgtccccagccttctcccaccccaccagacctccccactccttgggccccctagtctct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtccccagccttctcccaccccaccagacctccccactccttgggccccctagtctct 504

                                                                       
Query: 305 agagagttaggtaaatctctgtctgagtctagacctggtaatccttcgctgtatatgttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agagagttaggtaaatctctgtctgagtctagacctggtaatccttcgctgtatatgttg 564

                                                                       
Query: 365 gggggctcatatcagctagtgtatgctgcttggttggtggctcagtgtctgagagatccc 424
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 565 gggggctcatatcagctagtgtatgctgcttggttggtggctcagtgtc--agagatccc 622

                                                                       
Query: 425 aggattccaggttagttgagactgccgatcctcatatagggtcaccatcctcctcagctt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aggattccaggttagttgagactgccgatcctcatatagggtcaccatcctcctcagctt 682

                                                                       
Query: 485 cttccagcttttccctaattcaaccacaggggtcaccagcttatgtccattggttgagta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cttccagcttttccctaattcaaccacaggggtcaccagcttatgtccattggttgagta 742

                                                                       
Query: 545 taaatatctgcatctgactctttcagctgtttcttgggcctttaagaagacagagttgac 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 taaatatctgcatctgactctttcagctgtttcttgggcctttaagaagacagagttgac 802

                                                                
Query: 605 tgtgggatggcaacctcaacttcgggatgtaggaggtgggggccccctctagt 657
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgtgggatggcaacctcaacttcgggatgtaggaggtgggggccccctctagt 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)