Query= MSMg01no154_h08.b1 MSMg01no154_h08.b1 CHROMAT_FILE:
MSMg01no154_h08.b1 PHD_FILE: MSMg01no154_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:05 2005
(389 letters)
>mm_chr2_113662022_113662812
Length = 791
Score = 632 bits (327), Expect = 0.0
Identities = 370/385 (96%), Gaps = 2/385 (0%)
Strand = Plus / Minus
Query: 1 accccctccacattgggggttcagacttcagtataatttttaaggggacataaccactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 619 accccctccacattgggggttcagacttcagtataatttttaaggggacataaacactga 560
Query: 61 gtgcttattccagccagtgtacatctgtgggtacagggcctgaactagagcttcttgtga 120
|||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 559 gtgcttattccagctagtgtccatctgtgggtacagggcctgagctagagcttcttgtga 500
Query: 121 gttctgtatcctaactcattcttccgaacaccaagtcccagctgtgtgcagccttcatgg 180
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctctgtagcctaactcattcttccgaacaccaagtcccagctgtgtgcagccttcatgg 440
Query: 181 agaatcagcatttaaaccatgcactcggtccatttctgtgaccgtaacctgaatggaaca 240
|||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 439 agaagcagcatttaaaccatgcgctcggcccatttctgtgaccgtaacctgaatggaaca 380
Query: 241 agtggggacagtggactttgctgcctctaaattctgatgaggtttaaaaaactctt--tt 298
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 agtggggacagtgaactttgctgcctctaaattctgatgaggtttaaaaaactcttattt 320
Query: 299 tttttctaaccctttttctcccaccccactttccatattgttcatacgagagtttggtag 358
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 319 tttttctaaccctttttctcccaccccactttccatattgttcacacgagagtttggcag 260
Query: 359 gcgtcttagtcagggtttctattcc 383
| |||||||||||||||||||||||
Sbjct: 259 gtgtcttagtcagggtttctattcc 235
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 791
Length adjustment: 9
Effective length of query: 380
Effective length of database: 782
Effective search space: 297160
Effective search space used: 297160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_h08.g1 MSMg01no154_h08.g1 CHROMAT_FILE:
MSMg01no154_h08.g1 PHD_FILE: MSMg01no154_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:06 2005
(288 letters)
>mm_chr2_113557346_113558032
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 281/287 (97%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 cttgggacacgagaaaaaaaaatctcttcatctccagaaaaaccaatgacctacaattga 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cttgggacacgagaaaaaaaaatctcttcatctccagaaaaaccaatgaggtacaattga 260
Query: 61 ctcacagaaaactacatccagaatatgaactatatcaagactgagacttgatctcttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcacagaaaactacatccagaatatgaactatatcaagactgagacttgatctcttggc 320
Query: 121 aatgtcacaaaagcccactgattgcttgtcctctctatcctattaaattggcctccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtcacaaaagcccactgattgcttgtcctctctatcctattaaattggcctccaaat 380
Query: 181 actcctttgtggagaatcttcctagggtgattattggaaaagaagtatctaaaggttgtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 actcctttgtggagaatcttcctagggtgattattggaaaagaagtatctaaagcttgtt 440
Query: 241 gttttgattattagcatcttagcggggaggaggcttatgcatcctaa 287
|||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 441 gttttgattag-agcatcttagtggggaggaggcttatgcatcctaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
