TATXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAAAGAGGATCCGCGGAA
TTCATTAATTGCTGAATCTGCCTTTGTATAATGAACTTAAGCATTTCTAT
AAAAAAGTTTCAGAGAGGGAATTATTCCCTTTTATGCCTTTCAATCTTAT
GCTATGTGAGGACCCAGCATCCATTCCCTCTAGAAGATGTGACAGCAAGG
TATCACTTGGGATGTAGAAAGCTGTGCTTAGCAGACATTGGAAACTGCCA
ATACTTTGACATAAAAATCCTAGTCTCTAGAATTGTGAGAAACAAATCAT
TTACTAGAGAGGATTTAGTCTCACACATTTTACTGTAGCATTGTGATGGA
TAAAGACAAATAGGTATTCTACCATAAAACAAAACAAACACAAAGCAAAA
TGGAATCTAAAAGTTGACTTGAAGATCATATTTTCTGCTGTTAGTGGCAC
TGAGGTGTTCCCTATGGTTTCAAGGGATTAACTAAAATTTTTCATTATGT
TCTTCTTATATTCCTCCCTGAGCAAACAGTTTTGCTTCCATCAATGAAAA
TACTTGTCATTTTCTTTATTAGACAGAATCACAAAATTCCATCTGGCCTA
TATCTGCTTGTCACAACCTGCACATCTCATAGGTGAGAATAATTGTGTTC
TCTGAAGACTTTTCTGTGGCAAGCCCTGAAATGTGATGCAGGAGTCCTAC
CTCAGATCCTGTA

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCCTCAAGGTAAATTTATGATTAATCTTT
CGGTACCAAGACATCAATATAATACATGTAATATAATTTATATAACATAT
AAATTAAAACATATTTATTTATTCATTTAAAAATTAATGTGACATGTTGA
CTTGGAGTCCTTTGGTTAAATTCCCAGGAGTGACATGGCTGGGCTTATAT
GGAAATTCAATTTTCAGTTTTTCAAGGAACTTATATACAAACCTCTACAT
TAGTTGAACTAGTGTGTAAGGAATCCTTTTTATCTACATCCTTGCCAGCG
TTTGTTGATAATTGTTGGAATAAGGACTGTTATTCTCATTAGGGTGAAAT
AAAATCTCAAGGAAGTTTTTATGTTTACTTATCTGAATGCTAGTGAAATT
AAATACATTTTTATGTTCATTGACAATTTGTATTACATCTTCTGAGAACT
ATTTGTTTCATTAACCCATTTTTGGATGGGGTTAATTTCTTCTGTTTAAT
CTTTTGCATATTTATATATTCAAGAATATAGATATTAACTCTCTGTCAGA
TATATAGTAAGCAAATAAATTCTTCCAGGTTTTATTCTTTCCCTTTTTTA
AATTTCTTCCTTGGCAGGACAGAATGTATTAAATATCATAAATTTCCATT
CATCAGTTN

Query= MSMg01no154_p11.b1 MSMg01no154_p11.b1 CHROMAT_FILE:
MSMg01no154_p11.b1 PHD_FILE: MSMg01no154_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:45 2005
         (644 letters)



>mm_chr2_53614323_53615366
          Length = 1044

 Score =  797 bits (412), Expect = 0.0
 Identities = 433/440 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcctttgtataatgaacttaagcatttctataaaaaagtttcagagagggaattattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgcctttgtataatgaacttaagcatttctataaaaaagtttcagagagggaattattc 260

                                                                       
Query: 61  ccttttatgcctttcaatcttatgctatgtgaggacccagcatccattccctctagaaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttttatgcctttcaatcttatgctatgtgaggacccagcatccattccctctagaaga 320

                                                                       
Query: 121 tgtgacagcaaggtatcacttgggatgtagaaagctgtgcttagcagacattggaaactg 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgacagcaaggtaccacttgggatgtagaaagctgtgcttagcagacattggaaactg 380

                                                                       
Query: 181 ccaatactttgacataaaaatcctagtctctagaattgtgagaaacaaatcatttactag 240
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 ccaatactttgacataaaaatcctagcctctagaattgtgagaaacaaatcatttactag 440

                                                                       
Query: 241 agaggatttagtctcacacattttactgtagcattgtgatggataaagacaaataggtat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 agaggatttagtctcacacattttactgtagcattgtgatggataaagacagataggtat 500

                                                                       
Query: 301 tctaccataaaacaaaacaaacacaaagcaaaatggaatctaaaagttgacttgaagatc 360
           ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct: 501 tctaccataaaacaaaacaaacacaaagcaaaatggaatatagaagttgacttgaagatc 560

                                                                       
Query: 361 atattttctgctgttagtggcactgaggtgttccctatggtttcaagggattaactaaaa 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atattttctgctgttagtggcaccgaggtgttccctatggtttcaagggattaactaaaa 620

                               
Query: 421 tttttcattatgttcttctt 440
            |||||||||||||||||||
Sbjct: 621 attttcattatgttcttctt 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)