ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGACAGTCACCCCTCTCGTTGCTCGGCTATCTTTTGTTATGTGGATA
AGACTTTATGCTGCTCATTACTGCTTGTCATTTAGAGCTTTCTCTTATGA
AAGCTTAAAATCTACATATGTCATAGTTGAAAACTGTATGAGTGTGAATC
CAGAAGAAATTATTAATTGAGTTATTTTTAATCTTGACAAGCATCTCTTA
AGTATTTCTACCTCATGGCCATAATTGGGGAGGTCTTTAAAAACTGAAGA
CAGGTATGAATCATTTTCCTTCAAAAGGACTGAATTTCGTGCTGTATAAA
TACCACTTTAAGCTTCTTGCTAAACATGGATGCTTCTTATTTCCTTTCCT
ATTTGCATCCATTATCCAGATAAAATCTACAAGATGCTTAATATATACCA
AGTATTCAAAAGCCATATGGGTTAAAACCCTCTAAAATGAAACGTGTCTC
AAATATTTACTGTTTAAGAATAAAGACCACAGAGAAATTTCTCACGGGAT
CTCGTAAAATCCCTCCAGTGGTTATGAGAGGTGGAGAGAGCTTTGGAAAG
GACTGACAGTCCACCACCACTGCCTACCTTCCTGTGAAACACCTAAACTG
ATATCTGCAGCATCCAAAACCTTCCCTGGAGTGCTCATTGCTCCCTACTC
TGGATACGCTGTGTTCCATGGAGGCTTCTAATCACTGTN

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTGTTTAGCTCTGAGCCCCATTTTTT
AATGGGGTTATTTGATTTCCTGGAGTCCACCTTCTTGAGTTCTTTATATA
TATTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCC
CAATATGTTGGTGGCCTTTTTGTCTTATTGACTGTGTCTTTTGCCTTACA
GAAGCTTTGCAGTTTCATGAGGTCCCATTTGTCAATTCTCTATCTTACAG
CACAAGCCATTGCTGTTATATTCAGGAATTTTTCCCCTGTGCCAATATCT
TCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTGTCTGGTTT
TATGTGTGCTCCTCGATCCACTTAGATTTGACCTTAGTACAAGGAGATAG
GAATGGATGAATTCGCATTCTTCTACATGATAACCACCAGTTGTACCAGC
ACCATTTGTTGAAAACGCTGTCTTATTTCCACTGGATGGATTTACCTCCG
CTGTCGAAAATCACTTGACCATCTGTGTGTGCGTTCACTTCTGGCCCTTT
ACCTCTATTCTACTGTTTTACTTGTCTTTCACTGTACCATTACCTTGCCG
CTTTTATCATTTTCGCTTGGCACCATTGTTTCATTTACGTGTTTCCCGAT
TCCCCCCCATGCCCTTTTATCCTCGATAACACCCTTTGCCA

Query= MSMg01no155_e21.b1 MSMg01no155_e21.b1 CHROMAT_FILE:
MSMg01no155_e21.b1 PHD_FILE: MSMg01no155_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:11 2005
         (608 letters)



>mm_chr2_116229903_116230910
          Length = 1008

 Score = 1139 bits (589), Expect = 0.0
 Identities = 601/605 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgacagtcacccctctcgttgctcggctatcttttgttatgtggataagactt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgacagtcacccctctcgttgctcggctatcttttgttatgtggataagactt 263

                                                                       
Query: 64  tatgctgctcattactgcttgtcatttagagctttctcttatgaaagcttaaaatctaca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgctgctcattactgcttgtcatttagagctttctcttatgaaagcttaaaatctaca 323

                                                                       
Query: 124 tatgtcatagttgaaaactgtatgagtgtgaatccagaagaaattattaattgagttatt 183
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgtcatagttgaaaactgtatgagtgtgaatccagaagaaattattaattgagttatt 383

                                                                       
Query: 184 tttaatcttgacaagcatctcttaagtatttctacctcatggccataattggggaggtct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttaatcttgacaagcatctcttaagtatttctacctcatggccataattggggaggtct 443

                                                                       
Query: 244 ttaaaaactgaagacaggtatgaatcattttccttcaaaaggactgaatttcgtgctgta 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 444 ttaaaaactgaagacaggtatgaatcattttccttcaaaaggactgaatttcatgctgta 503

                                                                       
Query: 304 taaataccactttaagcttcttgctaaacatggatgcttcttatttcctttcctatttgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taaataccactttaagcttcttgctaaacatggatgcttcttatttcctttcctatttgc 563

                                                                       
Query: 364 atccattatccagataaaatctacaagatgcttaatatataccaagtattcaaaagccat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atccattatccagataaaatctacaagatgcttaatatataccaagtattcaaaagccat 623

                                                                       
Query: 424 atgggttaaaaccctctaaaatgaaacgtgtctcaaatatttactgtttaagaataaaga 483
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 624 atgggttaaaaccctctaaaatgaaatgtgtctcaaatatttactgtttaagaataaaga 683

                                                                       
Query: 484 ccacagagaaatttctcacgggatctcgtaaaatccctccagtggttatgagaggtggag 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccacagagaaatttctcacgggatctcgtaaaatccctccagtggttatgagaggtggag 743

                                                                       
Query: 544 agagctttggaaaggactgacagtccaccaccactgcctaccttcctgtgaaacacctaa 603
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 744 agagctttggaaaggactgacagtccaccaccactgcctaccttcctgggaaacacctaa 803

                
Query: 604 actga 608
           |||||
Sbjct: 804 actga 808


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)