Query= MSMg01no155_i06.b1 MSMg01no155_i06.b1 CHROMAT_FILE:
MSMg01no155_i06.b1 PHD_FILE: MSMg01no155_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:26 2005
(375 letters)
>mm_chr2_3605328_3606102
Length = 775
Score = 706 bits (365), Expect = 0.0
Identities = 368/369 (99%)
Strand = Plus / Minus
Query: 5 gaattcccaaagaattctctctagagaaccagctgactttgcatacagagactctgtgtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gaattcccaaagaattctctctagagaaccagctgactttgcatacagagactctgtgtc 716
Query: 65 aaataggaacaaggtacatgactgaggactatcaccaaagattgctccctgctaactgta 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aaataggaacaaggtagatgactgaggactatcaccaaagattgctccctgctaactgta 656
Query: 125 tgcattccttggtatgaacaagctctcctccccacacccccacatacaaacatacaaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tgcattccttggtatgaacaagctctcctccccacacccccacatacaaacatacaaaca 596
Query: 185 cacacacagacaaacacagagagacagagacagagagacacacagcgagagacaatgggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cacacacagacaaacacagagagacagagacagagagacacacagcgagagacaatgggg 536
Query: 245 agaaaatggaagagccattgaaatctttttgaatctcacttttttatcatctgacccgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agaaaatggaagagccattgaaatctttttgaatctcacttttttatcatctgacccgat 476
Query: 305 ttctcttgcccacacctaatttggcagtaacctgtcttaagcaactcttttttttttttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ttctcttgcccacacctaatttggcagtaacctgtcttaagcaactcttttttttttttt 416
Query: 365 ttttttttt 373
|||||||||
Sbjct: 415 ttttttttt 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_i06.g1 MSMg01no155_i06.g1 CHROMAT_FILE:
MSMg01no155_i06.g1 PHD_FILE: MSMg01no155_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:26 2005
(549 letters)
>mm_chr2_3460731_3461679
Length = 949
Score = 1046 bits (541), Expect = 0.0
Identities = 547/549 (99%)
Strand = Plus / Plus
Query: 1 ttggctcctccagcatcaagtctgccaggattcagccatgcttcctgccatgatgataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggctcctccagcatcaagtctgccaggattcagccatgcttcctgccatgatgataat 260
Query: 61 ggactaaacctcggaaactatactccagccctaattaaatgtttttctttataagagttg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactaaaccttggaaactatactccagccctaattaaatgtttttctttataagagttg 320
Query: 121 ccttggtcatgttgtctctttacagcaaagaaaccctaagacacaaagccactttgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ccttggtcatgttgtctctttacagcaaagaaaccctaagacacaaagccactttgtgaa 380
Query: 181 gcatgttgatctcatcgtttagctagcatttggatgtgggcacctagtatttttataaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatgttgatctcatcgtttagctagcatttggatgtgggcacctagtatttttataaca 440
Query: 241 caccaacccatctatcccatgcccttacttccttctcactatgactagcaatattaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caccaacccatctatcccatgcccttacttccttctcactatgactagcaatattaaagt 500
Query: 301 cattgcaacctctggcaccaggctttggccctgtacttccctactgaattattgtagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cattgcaacctctggcaccaggctttggccctgtacttccctactgaattattgtagaat 560
Query: 361 ctaccttttgcctagacttccctgacacccagacaactggccatggatggagaaaagctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaccttttgcctagacttccctgacacccagacaactggccatggatggagaaaagctc 620
Query: 421 ccactcatgagaactgtctgtaaccaactctgtgcctcatcctagggagtcttcagtgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccactcatgagaactgtctgtaaccaactctgtgcctcatcctagggagtcttcagtgag 680
Query: 481 tctggtagtccttccttgttttctgagttatttagctctcctatactcagagaagactgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctggtagtccttccttgttttctgagttatttagctctcctatactcagagaagactgt 740
Query: 541 tctgtttta 549
|||||||||
Sbjct: 741 tctgtttta 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
