Query= MSMg01no156_b20.b1 MSMg01no156_b20.b1 CHROMAT_FILE:
MSMg01no156_b20.b1 PHD_FILE: MSMg01no156_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:09 2005
(316 letters)
>mm_chr2_119613563_119614283
Length = 721
Score = 588 bits (304), Expect = e-172
Identities = 311/316 (98%), Gaps = 5/316 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaacccccttccctgccgtcccttcccacaaagtttatcccctttaaggtctag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacccccttccctgccgtcccttcccacaaagtttatcccctttaaggtctag 263
Query: 64 ccagaatcaactttgataaaacaacaacaacaaaacaaaac-----tttaccaatcagtt 118
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 ccagaatcaactttgataaaacaacaacaacaaaacaaaacaaaactttaccaatcagtt 323
Query: 119 ctgccccctgaacttctaaacttggatggtctgaaacccaagcacttgcactaaccactt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgccccctgaacttctaaacttggatggtctgaaacccaagcacttgcactaaccactt 383
Query: 179 gtatggagcagactgctgcaattagtagttaccttttcacaagagaagttctttcagcct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtatggagcagactgctgcaattagtagttaccttttcacaagagaagttctttcagcct 443
Query: 239 tgtgatatgaaaggcttgagtaattctggcacttgggagactgatattggaggatgacag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtgatatgaaaggcttgagtaattctggcacttgggagactgatattggaggatgacag 503
Query: 299 actcaatgtctactta 314
||||||||||||||||
Sbjct: 504 actcaatgtctactta 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 721
Length adjustment: 9
Effective length of query: 307
Effective length of database: 712
Effective search space: 218584
Effective search space used: 218584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_b20.g1 MSMg01no156_b20.g1 CHROMAT_FILE:
MSMg01no156_b20.g1 PHD_FILE: MSMg01no156_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:09 2005
(184 letters)
>mm_chr2_119779710_119780293
Length = 584
Score = 348 bits (180), Expect = e-100
Identities = 183/184 (99%)
Strand = Plus / Minus
Query: 1 attcttagctgttagaactgtttgacactacagtgttggttgctttttggatctctggga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 384 attcttagctgttagaactgtttgacactacagtgttggttgctttttggatttctggga 325
Query: 61 ataggacacgatataaaatagccagctgatcctaagaaggcagagtgggagtggggtagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataggacacgatataaaatagccagctgatcctaagaaggcagagtgggagtggggtagg 265
Query: 121 gttagggctaccagaatgaaagcaaaggcagttggtggcagaagacatcgttaggagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gttagggctaccagaatgaaagcaaaggcagttggtggcagaagacatcgttaggagaca 205
Query: 181 gttg 184
||||
Sbjct: 204 gttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
