XXXXXXXXXXXXXXXXXXXXXXXXXTTCCGCACGTGCGCGGAATTCCATT
AAATTTCCCAAAAAAAGAACGTCGTTCATTTAAACCATTTCACCTTTTTC
TCTAACAGATATACCACTTACAACTTCAGCAGAACTTACATATGTAAGAG
TGCTTGTACTGACCCACAGCTCTTAACAGTGCATCTTCCTCACAGTTGTA
AGCTACCTTATTTAAACATCTCCTTAATTTGTTTTTTTTTTTTTGAGAAT
ATAATAAAGTTACATGTTGGTCTTCCTTTTCCTCCTTCCATCCTTGCCCT
CATCAAATTCATTAATCCCTTTCCTCAAAAATTGTTATTACATGCATATA
TGTGCATATTGGCATAATACGTTCAATACTTAGTTATATATATATATTAG
CATTTAAGAACAAATTGCTGTGCTCTTCCTGAGGAAGAATATTTGTTCAG
ATCTCAGAATTCTTTGACTGTTTCTGTAAAGCTGTAGGGTTTTGTTTTTT
AGGGTTGAGGCTTCCTGAGATTTTCCACATTCACTCTGTCATATAAACTG
GTGTAGTCCTGATCCGCCTAATGTTTAGACAGTCATATGGATGCAACATT
ATTATGTAGTTTCCGATATTACTAGGAGACAGAGCTGTCTTAGTTAGGAC
TACTGCGGTTGTGAGGAACCACCAAAAGTAAGACAATTTGTAGATGAAAA
CATTTAGCTTGGAGTTGCTTCCAGTTTTAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXAATGTGCACATAGCTGCATTAGAACTCACACAGCC
AAGGAAGTATTCCACCCCAGGGAAAAGACAAAATACCTTAGAGCAGATAT
TCGTTGACAGCCTTTCTTCTTTCAGGAAGTTAATATGCAGACTACAAATA
AAGACCAAAACCTCAATAAAACATATAGCTACAAATAATCTAGATTTTAA
AAAGGAGGCAAATGAACTCAAAACTCAAAATAAAAAAGTACACATGTCAG
TAAATGTTAGAGAAATGTTCAGTACAATTATAAGAAAAGGAAATTAAGTT
AAATGTTGATACTATCCTACCCTGTCAGAATAGCATTTAAAAAGCAAAAC
AAAACAAAACAAACTCATAAAACCAATTAACACATGTTGGCAAATGTTTG
ATGATAAAGAAATGATTATAAAATTTTGGTAGGAATGTAAATTAATCTGG
TTATTATGGAAAAAGTGTATTATGAAAAGAGTAGATAAATAATAATAATT
ATTATATATAAATATGTAATATAATACTGCAAAATATGATCCAAAGTGGG
AACTATGTCTCAAAAGTAATGAGTTGATCCAGGATATGGTGGTTTGTACA
AGAATGGAACCCACAGACCAATACATTTCAAGCAACTGAAAATGAATCAT
CTATGTTATTGAAGAATGCACCCCTTTGTAAATAGA

Query= MSMg01no157_a11.g1 MSMg01no157_a11.g1 CHROMAT_FILE:
MSMg01no157_a11.g1 PHD_FILE: MSMg01no157_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:18 2005
         (671 letters)



>mm_chr2_41686328_41687397
          Length = 1070

 Score = 1253 bits (648), Expect = 0.0
 Identities = 665/674 (98%), Gaps = 7/674 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgtgcacatagctgcattagaactcacacagccaaggaagtattccacccc---aggg 57
           |||||||||||||||||||||||||||||||||||||||||||||||||       ||||
Sbjct: 201 aatgtgcacatagctgcattagaactcacacagccaaggaagtattcca----taaaggg 256

                                                                       
Query: 58  aaaagacaaaataccttagagcagatattcgttgacagcctttcttctttcaggaagtta 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaagacaaaataccttagagcagatattcgttgacagcctttcttctttcaggaagtta 316

                                                                       
Query: 118 atatgcagactacaaataaagaccaaaacctcaataaaacatatagctacaaataatcta 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atatgcagactacaaataaagaccaaaacctcaataaaacatatagctacaaataatcta 376

                                                                       
Query: 178 gattttaaaaaggaggcaaatgaactcaaaactcaaaataaaaaagtacacatgtcagta 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gattttaaaaaggaggcaaatgaactcaaaactcaaaataaaaaagtacacatgtcagta 436

                                                                       
Query: 238 aatgttagagaaatgttcagtacaattataagaaaaggaaattaagttaaatgttgatac 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aatgttagagaaatgttcagtacaattataagaaaaggaaattaagttaaatgttgatac 496

                                                                       
Query: 298 tatcctaccctgtcagaatagcatttaaaaagcaaaacaaaacaaaacaaactcataaaa 357
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 497 tatcctaccctgtcagaatagcatttaaaaagcaaaccaaaacaaaacaaactcataaaa 556

                                                                       
Query: 358 ccaattaacacatgttggcaaatgtttgatgataaagaaatgattataaaattttggtag 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ccaattaacacatgttggcaaatgtttgatgataaagaaatgattataaaattttggtag 616

                                                                       
Query: 418 gaatgtaaattaatctggttattatggaaaaagtgtattatgaaaagagtagataaataa 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gaatgtaaattaatctggttattatggaaaaagtgtattatgaaaagagtagataaataa 676

                                                                       
Query: 478 taataattattatatataaatatgtaatataatactgcaaaatatgatccaaagtgggaa 537
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 taataattattacatataaatatgtaatataatactgcaaaatatgatccaaagtgggaa 736

                                                                       
Query: 538 ctatgtctcaaaagtaatgagttgatccaggatatggtggtttgtacaagaatggaaccc 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ctatgtctcaaaagtaatgagttgatccaggatatggtggtttgtacaagaatggaaccc 796

                                                                       
Query: 598 acagaccaatacatttcaagcaactgaaaatgaatcatctatgttattgaagaatgcacc 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 acagaccaatacatttcaagcaactgaaaatgaatcatctatgttattgaagaatgcacc 856

                         
Query: 658 cctttgtaaataga 671
           ||||||||||||||
Sbjct: 857 cctttgtaaataga 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1070
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1060
Effective search space:   700660
Effective search space used:   700660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)