Query= MSMg01no158_i20.b1 MSMg01no158_i20.b1 CHROMAT_FILE:
MSMg01no158_i20.b1 PHD_FILE: MSMg01no158_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:05 2005
(316 letters)
>mm_chr2_9320331_9321046
Length = 716
Score = 534 bits (276), Expect = e-156
Identities = 303/314 (96%), Gaps = 5/314 (1%)
Strand = Plus / Minus
Query: 4 ggaattcatttttctgttgcttgatgctgtagttcattggcat-aaaaacatgtaagtct 62
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 651 ggaattcatttttctgttgcttgatgctgtagttcattggcataaaaaacatgtaagtct 592
Query: 63 tttgactatgatagattcactcaagactcgctggatactaaggagtaagtttttgtttgt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tttgactatgatagattcactcaagactcgctggatactaaggagtaagtttttgtttgt 532
Query: 123 ttgtctgtttgtttttttgcctccactatctttgggctgtaaatgcctcatttgtcagta 182
| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 531 t----tgtttgtttgtttgcctccactatctttggactgtaaatgcctcatttgtcagtg 476
Query: 183 gatagaaaaaataacttttacaagatatggtatgagtgaattgatggtgactttgtctca 242
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 475 gatagagaaaataacttttacaagatatggtatgagtgaattgatggtgaccttgtctca 416
Query: 243 gggggaagcacgtgaatgataggaaaaatgaggcaatctattttaaacagagtccaccac 302
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gggggaagcacatgaatgataggaaaaatgaggcaatctattttaaacagagtccaccac 356
Query: 303 caggaaaagaactc 316
||||||||||||||
Sbjct: 355 caggaaaagaactc 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_i20.g1 MSMg01no158_i20.g1 CHROMAT_FILE:
MSMg01no158_i20.g1 PHD_FILE: MSMg01no158_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:05 2005
(296 letters)
>mm_chr2_9189007_9189709
Length = 703
Score = 470 bits (243), Expect = e-137
Identities = 282/299 (94%), Gaps = 9/299 (3%)
Strand = Plus / Plus
Query: 1 ttacattgggatgtaggtatttcagttcacagagatctcaagtataaatgctcttggcag 60
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 ttacattgggatgtaagtatttca-ttcacagagatctcaagtataaatgctcttggcag 259
Query: 61 agagaatagatagctaaaagtcacattgaaaactaggtgacatgagaggactcac----c 116
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
Sbjct: 260 agagaatagatagctaaaagtcacattgaagactaggtgacatgggaggactcactcacc 319
Query: 117 tccgacaatatgtaaaagttttcatgcttgagactgtaattcagaaaac----aaaacaa 172
||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||
Sbjct: 320 tccgacaatatgtaacagttttcatgcttgagactgtaattcggaaaacgaacaaaacaa 379
Query: 173 aactgggtccattacagaaatcaataatgaaaacatttcaccagacatcaccagagtggg 232
||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 380 aactgggtccattacagaaatcaataaggaaaacatttcactagacatcaccagagtggg 439
Query: 233 aaatcccagacttgactaagtcaaacagaatgctttctattcgcttgcttcttcatttc 291
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 aaatcccagacttgactaagtcaaacagaatgctttctatttgcttgcttcttcatttc 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 703
Length adjustment: 9
Effective length of query: 287
Effective length of database: 694
Effective search space: 199178
Effective search space used: 199178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
