Query= MSMg01no161_b03.b1 MSMg01no161_b03.b1 CHROMAT_FILE:
MSMg01no161_b03.b1 PHD_FILE: MSMg01no161_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:16 2005
(409 letters)
>mm_chr2_34298243_34299051
Length = 809
Score = 717 bits (371), Expect = 0.0
Identities = 397/407 (97%), Gaps = 4/407 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtctggcagttttggcgttgagagtgtgagcctaggaaggactggcacaagca 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtctggcagttttggtgttgagagtgtgagcctaggaaggactggcacaagca 264
Query: 65 agacct--ttaggacgctgctagcccgtgtgatattatggaggtagcaccacaatgcagt 122
||| | |||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 265 aga--tggttaggacgctgctagcttgtgtgatattatggaggcagcaccacaatgcagt 322
Query: 123 ttggctttagctgcaagtgccagtatgaacatatttgcaggtcttagtcctccctgaggc 182
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttggctttagctgcaagtggcagtatgaacatatttgcaggtcttagtcctccctgaggc 382
Query: 183 cttggaattgtcccctgtgaagaaggcactttgtcaccaggcttattgcactaactctgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttggaattgtcccctgtgaagaaggcactttgtcaccaggcttattgcactaactctgt 442
Query: 243 agagattcatttgatgaacttgcctcaccagccttttgataagtttatggacttttcaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agagattcatttgatgaacttgcctcaccagccttttgataagtttatggacttttcaaa 502
Query: 303 agttgtaaagtaagaaatggagagttgtgttgttttctcttgatttaatttgacattgtt 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 503 agttgtaaagtaagaaatggagagttgtgttgttttctcttgatttaatttgacattgct 562
Query: 363 gaagagttgactgggattgaagttgttgatttcagattttgaaatgt 409
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaagagttgactgggattgaagttgttgatttcagattttgaaatgt 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_b03.g1 MSMg01no161_b03.g1 CHROMAT_FILE:
MSMg01no161_b03.g1 PHD_FILE: MSMg01no161_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:16 2005
(381 letters)
>mm_chr2_34429612_34430392
Length = 781
Score = 696 bits (360), Expect = 0.0
Identities = 372/376 (98%)
Strand = Plus / Minus
Query: 6 aacaatgaactgtgcagagagtgagtgagcgttcggaagagtaagggcttgcctgtggct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aacaatgaactgtgcagagagtgagtgagcgttcggaagagtaagggcttgcctgtggct 522
Query: 66 agagaaggagggagaaggatggggcgtacaggaaaggagtctaaagggagggagttctgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 agagaaggagggagaaggatggggcgtacaggaaaggagtctaaagggagggagttctgg 462
Query: 126 cacacaggagagcatggctgtgcaaggaactgactggggaaggaaaaccatcctcagtcc 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 461 cacacaggagagcatggctgtgcaaggaactgactggggaaggaaaaccatcctcagttc 402
Query: 186 ccttaactgtactcaaaatcttgcgatcctttccagtccccaaacattcctgctttagcc 245
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 401 ccttaactgtactcaaaatcttgcaatcctttccagtccccaaacattcctgctttagcc 342
Query: 246 aagttggactctgctcaggttgtaccatgtagccagggcatcccttcttcaaaaacgtct 305
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 341 aagttggactctgctcagtttgtaccatgtagcgagggcatcccttcttcaaaaacgtct 282
Query: 306 ataggtcaaagtccattcaatagagccttccttgattctctcttataacctgtagggatc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ataggtcaaagtccattcaatagagccttccttgattctctcttataacctgtagggatc 222
Query: 366 aggggaaggctctcat 381
||||||||||||||||
Sbjct: 221 aggggaaggctctcat 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
