Query= MSMg01no161_b19.b1 MSMg01no161_b19.b1 CHROMAT_FILE:
MSMg01no161_b19.b1 PHD_FILE: MSMg01no161_b19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:21 2005
(418 letters)
>mm_chr2_87648666_87649483
Length = 818
Score = 702 bits (363), Expect = 0.0
Identities = 393/403 (97%)
Strand = Plus / Minus
Query: 16 gaattccttctcatgcaattcactgccttcagtgttttccactctgtgatatggtattgc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gaattccttctcatgcaattcactgccttcagtgttttccactctgtgatatggtattgc 559
Query: 76 ctataggctttgtgcttggcccgcatatattttcattttcttatatccaaatctatattg 135
||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||
Sbjct: 558 ctataggctttgtgcttgggttgtatatattttcattttcttatatccaaatccatattg 499
Query: 136 tgaaagttctaaaaggtatttttgcatcaatttgtgatgcaaatcctattatttgacaaa 195
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 498 tgaaagttctaaaaggtatttttgcatcgatttgtgatgcaaatcctattatttgacaaa 439
Query: 196 ggtgacttaatgtattcttaaaaaattatgaatgagcctaacccgattcaggctaatccc 255
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 438 ggtgacttaatgtattcttaaaaaattatgaataagcctaacccgattcaggctaatccc 379
Query: 256 aaggggaaacagcgggtgattattagctccagaacctcacctggtaaaaattttgaaatt 315
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaggggaaacagcaggtgattattagctccagaacctcacctggtaaaaattttgaaatt 319
Query: 316 tgtgtctgtgaatgtttaagtggctttgagtgaggatctaaataaagttatactatttcc 375
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 318 tgtgtctgtgaatgtttaagtggctttgagtgaggatctaaataaaattatactatttcc 259
Query: 376 attatctcctgcagaaagagaatttcatatcagtgatttggtg 418
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 258 attatctcgtgcagaaagagaatttcatatcagtgatttggtg 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_b19.g1 MSMg01no161_b19.g1 CHROMAT_FILE:
MSMg01no161_b19.g1 PHD_FILE: MSMg01no161_b19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:21 2005
(319 letters)
>mm_chr2_87466461_87467180
Length = 720
Score = 582 bits (301), Expect = e-171
Identities = 316/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 1 cataacagcttaaacaatctcttttaactctggttgtaagagatccagtgccctcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cataacagcttaaacaatctcttttaactctggttgtaagagatccagtgccctcttctg 259
Query: 61 acctcttttggcaataaacacttataaactcatgaagagaaaaa-cactcacagaaaatg 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 260 acctcttttggcaataaacacttataaactcatgaagagaaaaaacactcacagaaaatg 319
Query: 120 aaaataaagaaatcaggttcttttttggttttgttttttgtttttttgttttagagtgtt 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aagataaagaaatcaggttcttttttggttttgttttttgtttttttgttttagagtgtt 379
Query: 180 tttttt-ctaagtgagataataaggcaagtattttaattctgaagaagaaatgtacaaga 238
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttttttctaagtgagataataaggcaagtattttaattctgaagaagaaatgtacaaga 439
Query: 239 aaaagtagttgggaatgaataagtatggggctttaaagtttgacttttttatgtgacttt 298
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 440 aaaagtagttgggaatgaataagtatggggctttaatgtttgactttttaatgtgacttt 499
Query: 299 tacttgggagagaaaagttta 319
|||||||||||||||||||||
Sbjct: 500 tacttgggagagaaaagttta 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
